RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 DGKDQ16760 1214 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 YAF2Q8IY57 180 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 OR6B3Q8NGW1 331 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 PRPF31Q8WWY3 499 aaKnown RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 SMC6Q96SB8 1091 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 POLRMTO00411 1230 aaKnown RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 NR5A1Q13285 461 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 ERCC6LQ2NKX8 1250 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 C8orf74Q6P047 294 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 TEX2Q8IWB9 1127 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 MAP3K14Q99558 947 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 CBX8Q9HC52 389 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 OSTNP61366 133 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 MCM6Q14566 821 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 SIRT2Q8IXJ6 389 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 SMAP1Q8IYB5 467 aaPredicted RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 RYBPQ8N488 228 aaPredicted RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 RUNDC3BQ96NL0 473 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 ITSN1Q15811 1721 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 NR3C2P08235 984 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 PLCG1P19174 1290 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 RNASE9P60153 205 aaKnown RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 BBOF1Q8ND07 529 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 PPP1R16BQ96T49 567 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 FHDC1Q9C0D6 1143 aaPredicted RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 RAB17Q9H0T7 212 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 BCL9O00512 1426 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 ERCC3P19447 782 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 CCNE1P24864 410 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 CAP2P40123 477 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 EVCP57679 992 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 ZBTB16Q05516 673 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 BFSP2Q13515 415 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 NOLC1Q14978 699 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSI2-209ENST00000579483 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 MB21D2Q8IYB1 491 aaPredicted RBP11.07□□□□□ -0.64
MSI2-209ENST00000579483 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
MSI2-209ENST00000579483 IFT81Q8WYA0 676 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 P3H4Q92791 437 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 HEXIM2Q96MH2 286 aaKnown RBP11.07□□□□□ -0.64
MSI2-209ENST00000579483 STRIP2Q9ULQ0 834 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 KIF1AQ12756 1690 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 TBX3O15119 743 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 MAN1A1P33908 653 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 BZW1Q7L1Q6 419 aaKnown RBP11.07□□□□□ -0.64
MSI2-209ENST00000579483 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 ANAPC5Q9UJX4 755 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.07□□□□□ -0.64
MSI2-209ENST00000579483 RFC5P40937 340 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 IFT20Q8IY31 132 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 XXYLT1Q8NBI6 393 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 RPGRIP1Q96KN7 1286 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 TUBGCP2Q9BSJ2 902 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 PPANQ9NQ55 473 aaKnown RBP11.07□□□□□ -0.64
MSI2-209ENST00000579483 ESYT2A0FGR8 921 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 DGAT1O75907 488 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 GPC3P51654 580 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 RDM1Q8NG50 284 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 LY9Q9HBG7 655 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 NR2E3Q9Y5X4 410 aa11.07□□□□□ -0.64
MSI2-209ENST00000579483 PVALEFA0A1B0GWK0 134 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 HOXA2O43364 376 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 PCIF1Q9H4Z3 704 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 FARP1Q9Y4F1 1045 aaPredicted RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 ABCB4P21439 1286 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 ZNF75DP51815 510 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 UAP1Q16222 522 aaPredicted RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 UNC13DQ70J99 1090 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 LINC00301Q8NCQ3 95 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 GANCQ8TET4 914 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 EHD4Q9H223 541 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 ERAP1Q9NZ08 941 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 RCOR1Q9UKL0 485 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 PRR12Q9ULL5 1215 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 NKRFO15226 690 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSI2-209ENST00000579483 PPARGP37231 505 aaPredicted RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 PPP2R5DQ14738 602 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 CC2D1AQ6P1N0 951 aaPredicted RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 DNAJC24Q6P3W2 148 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 SOCS4Q8WXH5 440 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 DDX50Q9BQ39 737 aaKnown RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 SAMD15Q9P1V8 674 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 MEGF6O75095 1541 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 DDNO94850 711 aaPredicted RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 BACE1P56817 501 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 RASSF7Q02833 373 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 TTBK2Q6IQ55 1244 aa11.06□□□□□ -0.64
MSI2-209ENST00000579483 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
MSI2-209ENST00000579483 SLC38A7Q9NVC3 462 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms