RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 SMAD3P84022 425 aaKnown RBP27.01■■□□□ 1.91
LIMD2-207ENST00000579329 RDM1Q8NG50 284 aa27.01■■□□□ 1.91
LIMD2-207ENST00000579329 FAM20AQ96MK3 541 aa27.01■■□□□ 1.91
LIMD2-207ENST00000579329 KCNMB3Q9NPA1 279 aa27.01■■□□□ 1.91
LIMD2-207ENST00000579329 GABBR1Q9UBS5 961 aa27.01■■□□□ 1.91
LIMD2-207ENST00000579329 KIF3AQ9Y496 699 aa27.01■■□□□ 1.91
LIMD2-207ENST00000579329 CDH23Q9H251 3354 aa27.01■■□□□ 1.91
LIMD2-207ENST00000579329 IGSF9BQ9UPX0 1349 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 PRUNE2Q8WUY3 3088 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 HSFX4A0A1B0GTS1 333 aaPredicted RBP27■■□□□ 1.91
LIMD2-207ENST00000579329 HSFX3A0A1B0GWH4 333 aaPredicted RBP27■■□□□ 1.91
LIMD2-207ENST00000579329 RSPH10B2B2RC85 870 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 TBX3O15119 743 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 RSPH10BP0C881 870 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 MARCH8Q5T0T0 291 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 MIER3Q7Z3K6 550 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 CKAP2LQ8IYA6 745 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 FBXO18Q8NFZ0 1043 aa27■■□□□ 1.91
LIMD2-207ENST00000579329 COL1A2P08123 1366 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 NBNO60934 754 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 CXCL10P02778 98 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 GPNMBQ14956 572 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 RUFY4Q6ZNE9 571 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 RPAINQ86UA6 219 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 RSPH3Q86UC2 560 aa26.99■■□□□ 1.91
LIMD2-207ENST00000579329 CDX2Q99626 313 aaPredicted RBP26.99■■□□□ 1.91
LIMD2-207ENST00000579329 CXXC1Q9P0U4 656 aaPredicted RBP26.99■■□□□ 1.91
LIMD2-207ENST00000579329 ZBBXA8MT70 800 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 MARCH6O60337 910 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 RPLP2P05387 115 aaKnown RBP26.98■■□□□ 1.91
LIMD2-207ENST00000579329 CTSHP09668 335 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 B3GNT9Q6UX72 402 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 POTEDQ86YR6 584 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 TRAPPC12Q8WVT3 735 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 BBXQ8WY36 941 aaPredicted RBP26.98■■□□□ 1.91
LIMD2-207ENST00000579329 FAM167AQ96KS9 214 aa26.98■■□□□ 1.91
LIMD2-207ENST00000579329 FOXP1Q9H334 677 aaPredicted RBP26.98■■□□□ 1.91
LIMD2-207ENST00000579329 SPTBN5Q9NRC6 3674 aaKnown RBP26.98■■□□□ 1.91
LIMD2-207ENST00000579329 ATP4AP20648 1035 aa26.97■■□□□ 1.91
LIMD2-207ENST00000579329 MBTPS1Q14703 1052 aa26.97■■□□□ 1.91
LIMD2-207ENST00000579329 ZNF484Q5JVG2 852 aa26.97■■□□□ 1.91
LIMD2-207ENST00000579329 CNKSR3Q6P9H4 555 aa26.97■■□□□ 1.91
LIMD2-207ENST00000579329 SLC4A7Q9Y6M7 1214 aa26.97■■□□□ 1.91
LIMD2-207ENST00000579329 BAIAP3O94812 1187 aa26.96■■□□□ 1.91
LIMD2-207ENST00000579329 BAG4O95429 457 aaKnown RBP26.96■■□□□ 1.91
LIMD2-207ENST00000579329 GNL2Q13823 731 aaKnown RBP26.96■■□□□ 1.91
LIMD2-207ENST00000579329 FAM26DQ5JW98 314 aa26.96■■□□□ 1.91
LIMD2-207ENST00000579329 SLFN12Q8IYM2 578 aa26.96■■□□□ 1.91
LIMD2-207ENST00000579329 SEMA6BQ9H3T3 888 aa26.96■■□□□ 1.91
LIMD2-207ENST00000579329 PCDHA2Q9Y5H9 948 aa26.96■■□□□ 1.91
LIMD2-207ENST00000579329 MYH9P35579 1960 aaKnown RBP26.95■■□□□ 1.91
LIMD2-207ENST00000579329 PPP2R5CQ13362 524 aa26.95■■□□□ 1.9
LIMD2-207ENST00000579329 MTHFD1LQ6UB35 978 aa26.95■■□□□ 1.9
LIMD2-207ENST00000579329 DNAJB3Q8WWF6 145 aa26.95■■□□□ 1.9
LIMD2-207ENST00000579329 HAS1Q92839 578 aa26.95■■□□□ 1.9
LIMD2-207ENST00000579329 VAV3Q9UKW4 847 aa26.95■■□□□ 1.9
LIMD2-207ENST00000579329 CEP131Q9UPN4 1083 aa26.95■■□□□ 1.9
LIMD2-207ENST00000579329 MAFAQ8NHW3 353 aaPredicted RBP26.94■■□□□ 1.9
LIMD2-207ENST00000579329 ZBTB10Q96DT7 871 aa26.94■■□□□ 1.9
LIMD2-207ENST00000579329 FAM49AQ9H0Q0 323 aaPredicted RBP26.94■■□□□ 1.9
LIMD2-207ENST00000579329 SMIM35A0A1B0GVV1 85 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 ZNF862O60290 1169 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 NEMFO60524 1076 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 OATP04181 439 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 KLRC1P26715 233 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 PRKCEQ02156 737 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 CALCRLQ16602 461 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 UGCGQ16739 394 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 TRMT1LQ7Z2T5 733 aaKnown RBP26.93■■□□□ 1.9
LIMD2-207ENST00000579329 NRBP2Q9NSY0 501 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.93■■□□□ 1.9
LIMD2-207ENST00000579329 TET1Q8NFU7 2136 aa26.93■■□□□ 1.9
LIMD2-207ENST00000579329 GJB2P29033 226 aa26.92■■□□□ 1.9
LIMD2-207ENST00000579329 MGAT3Q09327 533 aa26.92■■□□□ 1.9
LIMD2-207ENST00000579329 NOSTRINQ8IVI9 506 aa26.92■■□□□ 1.9
LIMD2-207ENST00000579329 MYLIPQ8WY64 445 aa26.92■■□□□ 1.9
LIMD2-207ENST00000579329 TTYH1Q9H313 450 aaPredicted RBP26.92■■□□□ 1.9
LIMD2-207ENST00000579329 SMC3Q9UQE7 1217 aa26.92■■□□□ 1.9
LIMD2-207ENST00000579329 WDR81Q562E7 1941 aa26.92■■□□□ 1.9
LIMD2-207ENST00000579329 ABHD14A-ACY1A0A1B0GW23 586 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 GRXCR1A8MXD5 290 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 ZBTB42B2RXF5 422 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 WNT7AO00755 349 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 EFCAB14O75071 495 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 CHRNA1P02708 482 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 ATP2A2P16615 1042 aaKnown RBP26.91■■□□□ 1.9
LIMD2-207ENST00000579329 ATP2B1P20020 1258 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 KCNJ6P48051 423 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 MRPS6P82932 125 aaKnown RBP26.91■■□□□ 1.9
LIMD2-207ENST00000579329 PLEKHG4Q58EX7 1191 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 SEPT8Q92599 483 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 SLC9A7Q96T83 725 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 CDY2AQ9Y6F7 541 aa26.91■■□□□ 1.9
LIMD2-207ENST00000579329 KIF28PB7ZC32 967 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 M0QZ92 97 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 EML1O00423 815 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 DNAJB2P25686 324 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 ORC2Q13416 577 aaPredicted RBP26.9■■□□□ 1.9
LIMD2-207ENST00000579329 IKBKEQ14164 716 aa26.9■■□□□ 1.9
LIMD2-207ENST00000579329 RAB30Q15771 203 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms