RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 CASTP20810 708 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 PDIA3P30101 505 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 SLC16A2P36021 539 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 AK2P54819 239 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 MAP2K1Q02750 393 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 APOBRQ0VD83 1088 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TRDNQ13061 729 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 COG2Q14746 738 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 WTAPQ15007 396 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TAF1CQ15572 869 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 FAM110CQ1W6H9 321 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 CCDC178Q5BJE1 867 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 IFIT1BQ5T764 474 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 BLOC1S2Q6QNY1 142 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 Q6ZUG5 572 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TMTC3Q6ZXV5 915 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 KCTD1Q719H9 257 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 RALYLQ86SE5 291 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 RAB11FIP4Q86YS3 637 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 SRBD1Q8N5C6 995 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF296Q8WUU4 475 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 CLEC4DQ8WXI8 215 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 BRF1Q92994 677 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 FAM84AQ96KN4 292 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 PARK7Q99497 189 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 FEZ1Q99689 392 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 SLF1Q9BQI6 1058 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 UBAC1Q9BSL1 405 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 C22orf23Q9BZE7 217 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 FAM117AQ9C073 453 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 JMJD4Q9H9V9 463 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 SLC24A3Q9HC58 644 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 GOPCQ9HD26 462 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TOMM22Q9NS69 142 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TMOD4Q9NZQ9 345 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 CPA4Q9UI42 421 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 GJD2Q9UKL4 321 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TPCN1Q9ULQ1 816 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 RIPK3Q9Y572 518 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 FRMPD2Q68DX3 1309 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 LTBP2Q14767 1821 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 DNAJC25-GNG10A0A024R161 153 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 KLF18A0A0U1RQI7 1052 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM232C9JQI7 657 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 KLRF2D3W0D1 207 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 FLOT1O75955 427 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 WISP1O95388 367 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 FDPSP14324 419 aaKnown RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 CFPP27918 469 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SMARCA1P28370 1054 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 CD68P34810 354 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SLC1A4P43007 532 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 GCLCP48506 637 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 STAT2P52630 851 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 OAZ1P54368 228 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 NRLP54845 237 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SNAP25P60880 206 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ERVK-24P63145 666 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 LACTBP83111 547 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ATP2B2Q01814 1243 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SCRN1Q12765 414 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 NPY5RQ15761 445 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ME3Q16798 604 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 QRICH1Q2TAL8 776 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ASPRV1Q53RT3 343 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 MUM1L1Q5H9M0 696 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 GPATCH4Q5T3I0 446 aaKnown RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 HFE2Q6ZVN8 426 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TTLL10Q6ZVT0 673 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 FAM160B2Q86V87 743 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 RIOX2Q8IUF8 465 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ADGRF4Q8IZF3 695 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TNS4Q8IZW8 715 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ANKRD13CQ8N6S4 541 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 FANCBQ8NB91 859 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SHCBP1Q8NEM2 672 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM40Q8WWA1 233 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 PLD4Q96BZ4 506 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF274Q96GC6 653 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SPZ1Q9BXG8 430 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 MOV10L1Q9BXT6 1211 aaKnown RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TANGO6Q9C0B7 1094 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 UBA5Q9GZZ9 404 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 SPATC1LQ9H0A9 340 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 KAT14Q9H8E8 782 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 ZFYVE28Q9HCC9 887 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 PAK6Q9NQU5 681 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 FEM1BQ9UK73 627 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 RABGAP1Q9Y3P9 1069 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 CYP46A1Q9Y6A2 500 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 FRMPD4Q14CM0 1322 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TANC1Q9C0D5 1861 aa4.41□□□□□ -1.7
SMARCE1-215ENST00000578995 TNRC18O15417 2968 aaPredicted RBP4.4□□□□□ -1.7
SMARCE1-215ENST00000578995 KAT6AQ92794 2004 aa4.4□□□□□ -1.7
SMARCE1-215ENST00000578995 EVPLQ92817 2033 aa4.4□□□□□ -1.7
SMARCE1-215ENST00000578995 GOLGA8BA8MQT2 603 aa4.4□□□□□ -1.71
SMARCE1-215ENST00000578995 ZBTB43O43298 467 aa4.4□□□□□ -1.71
SMARCE1-215ENST00000578995 EDIL3O43854 480 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms