RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 TRMT1LQ7Z2T5 733 aaKnown RBP17.28■□□□□ 0.36
IFT20-208ENST00000578985 SERINC5Q86VE9 423 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 DYDC2Q96IM9 177 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 EIF2AK1Q9BQI3 630 aaKnown RBP17.28■□□□□ 0.36
IFT20-208ENST00000578985 PPP1R12CQ9BZL4 782 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 COL1A2P08123 1366 aa17.28■□□□□ 0.36
IFT20-208ENST00000578985 POTEMA6NI47 508 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 DKC1O60832 514 aaKnown RBP eCLIP17.27■□□□□ 0.36
IFT20-208ENST00000578985 CYP2C18P33260 490 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
IFT20-208ENST00000578985 BFSP2Q13515 415 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 XKR3Q5GH77 459 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 MARCH8Q5T0T0 291 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 DTHD1Q6ZMT9 781 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 CCDC155Q8N6L0 562 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 RETREG2Q8NC44 543 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 TRAPPC12Q8WVT3 735 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
IFT20-208ENST00000578985 BADQ92934 168 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 TUBE1Q9UJT0 475 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.36
IFT20-208ENST00000578985 MBLAC1A4D2B0 266 aaPredicted RBP17.26■□□□□ 0.35
IFT20-208ENST00000578985 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 STBD1O95210 358 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 MAGEA10P43363 369 aaPredicted RBP17.26■□□□□ 0.35
IFT20-208ENST00000578985 MDM2Q00987 491 aaPredicted RBP17.26■□□□□ 0.35
IFT20-208ENST00000578985 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 PKP1Q13835 747 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 CTTNQ14247 550 aaKnown RBP17.26■□□□□ 0.35
IFT20-208ENST00000578985 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
IFT20-208ENST00000578985 IL17AQ16552 155 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 PRPF38BQ5VTL8 546 aaKnown RBP17.26■□□□□ 0.35
IFT20-208ENST00000578985 TPH2Q8IWU9 490 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 WNT8BQ93098 351 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 HSD17B14Q9BPX1 270 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 LXNQ9BS40 222 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
IFT20-208ENST00000578985 UMODL1Q5DID0 1318 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 ZBTB42B2RXF5 422 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 SLITRK3O94933 977 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 F13A1P00488 732 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 RBL2Q08999 1139 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 PDIA5Q14554 519 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 TRIM71Q2Q1W2 868 aaKnown RBP17.25■□□□□ 0.35
IFT20-208ENST00000578985 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
IFT20-208ENST00000578985 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 MTHFD1LQ6UB35 978 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 RUFY4Q6ZNE9 571 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 C4orf19Q8IY42 314 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 NIFKQ9BYG3 293 aaKnown RBP17.25■□□□□ 0.35
IFT20-208ENST00000578985 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
IFT20-208ENST00000578985 ZSWIM4Q9H7M6 989 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 WRAP73Q9P2S5 460 aaPredicted RBP17.25■□□□□ 0.35
IFT20-208ENST00000578985 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 SEPT9Q9UHD8 586 aaPredicted RBP17.25■□□□□ 0.35
IFT20-208ENST00000578985 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 SCN5AQ14524 2016 aa17.25■□□□□ 0.35
IFT20-208ENST00000578985 CKBP12277 381 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 KLRC1P26715 233 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 ANP32AP39687 249 aaKnown RBP17.24■□□□□ 0.35
IFT20-208ENST00000578985 THPOP40225 353 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 CCL23P55773 120 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 TAF2Q6P1X5 1199 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 TMEM199Q8N511 208 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 IGSF22Q8N9C0 903 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 ZBTB10Q96DT7 871 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
IFT20-208ENST00000578985 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 TANC1Q9C0D5 1861 aa17.24■□□□□ 0.35
IFT20-208ENST00000578985 TMEM150BA6NC51 233 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 MAGEB2O15479 319 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 LYPLA2O95372 231 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 SPATA31C1P0DKV0 1188 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 SELPP16109 830 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
IFT20-208ENST00000578985 FPGSQ05932 587 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 PTPAQ15257 358 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 TARBP2Q15633 366 aaKnown RBP17.23■□□□□ 0.35
IFT20-208ENST00000578985 MTERF2Q49AM1 385 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 ANO5Q75V66 913 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 GDF15Q99988 308 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
IFT20-208ENST00000578985 TUFT1Q9NNX1 390 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
IFT20-208ENST00000578985 ARID2Q68CP9 1835 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 VWA3AA6NCI4 1184 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 CAND2O75155 1236 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 MED24O75448 989 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 C22orf31O95567 290 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 BRD1O95696 1058 aa17.22■□□□□ 0.35
IFT20-208ENST00000578985 IQCF3P0C7M6 154 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms