RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 MTHFRP42898 656 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 TMEM62Q0P6H9 643 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 TMEM266Q2M3C6 531 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 TPRNQ4KMQ1 711 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 ZC3H14Q6PJT7 736 aaKnown RBP12.95□□□□□ -0.34
GGA3-206ENST00000578773 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
GGA3-206ENST00000578773 CASP10Q92851 521 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 NECTIN4Q96NY8 510 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 RTKNQ9BST9 563 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 FOXQ1Q9C009 403 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 KCNK12Q9HB15 430 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 CYP26B1Q9NR63 512 aa12.95□□□□□ -0.34
GGA3-206ENST00000578773 LOC400499M0QZD8 3231 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 BAZ2BQ9UIF8 2168 aaKnown RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 KINO60870 393 aaKnown RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 EPCAMP16422 314 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 ITIH3Q06033 890 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 SEMA3FQ13275 785 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 C1orf210Q8IVY1 113 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 GPR20Q99678 358 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 PADI3Q9ULW8 664 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 USP18Q9UMW8 372 aa12.94□□□□□ -0.34
GGA3-206ENST00000578773 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.94□□□□□ -0.34
GGA3-206ENST00000578773 ASH1LQ9NR48 2969 aaKnown RBP12.93□□□□□ -0.34
GGA3-206ENST00000578773 C2orf71A6NGG8 1288 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 SMARCA5O60264 1052 aaPredicted RBP12.93□□□□□ -0.34
GGA3-206ENST00000578773 FGFR1P11362 822 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
GGA3-206ENST00000578773 SP4Q02446 784 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 TBC1D8BQ0IIM8 1120 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 MARCH8Q5T0T0 291 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 TMC5Q6UXY8 1006 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 LRRC55Q6ZSA7 311 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 SIRT2Q8IXJ6 389 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 AUTS2Q8WXX7 1259 aa12.93□□□□□ -0.34
GGA3-206ENST00000578773 SMG5Q9UPR3 1016 aaKnown RBP12.93□□□□□ -0.34
GGA3-206ENST00000578773 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 ABCB11O95342 1321 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 RNF113AO15541 343 aaKnown RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 CFBP00751 764 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 HOXA13P31271 388 aaPredicted RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 MRPS6P82932 125 aaKnown RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 LMNB2Q03252 620 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 PGM5Q15124 567 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 ZKSCAN2Q63HK3 967 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 CYFIP1Q7L576 1253 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 FAM49AQ9H0Q0 323 aaPredicted RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 NAPBQ9H115 298 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
GGA3-206ENST00000578773 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
GGA3-206ENST00000578773 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 LAMA1P25391 3075 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 PRR5-ARHGAP8B1AHC4 643 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 ANP32CO43423 234 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 GNAT1P11488 350 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 MARK3P27448 753 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 PDE4AP27815 886 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
GGA3-206ENST00000578773 ARHGAP8P85298 464 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 QRICH1Q2TAL8 776 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 TMC7Q7Z402 723 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 GPR152Q8TDT2 470 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
GGA3-206ENST00000578773 SMG1Q96Q15 3661 aaKnown RBP12.9□□□□□ -0.34
GGA3-206ENST00000578773 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
GGA3-206ENST00000578773 HSPD1P10809 573 aaKnown RBP12.9□□□□□ -0.34
GGA3-206ENST00000578773 GNAT2P19087 354 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 SDHBP21912 280 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 RFX1P22670 979 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 PMLP29590 882 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 HSD17B4P51659 736 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 IGBP1P78318 339 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 DMWDQ09019 674 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 GRIK4Q16099 956 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.34
GGA3-206ENST00000578773 VSIG10LQ86VR7 867 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 WNT16Q9UBV4 365 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms