RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SLFN12Q8IYM2 578 aa24.43■■□□□ 1.5
CDC42EP4-203ENST00000578516 ATP8B4Q8TF62 1192 aa24.43■■□□□ 1.5
CDC42EP4-203ENST00000578516 ZBTB42B2RXF5 422 aa24.42■■□□□ 1.5
CDC42EP4-203ENST00000578516 SFNP31947 248 aa24.42■■□□□ 1.5
CDC42EP4-203ENST00000578516 PTGDRQ13258 359 aa24.42■■□□□ 1.5
CDC42EP4-203ENST00000578516 DYDC2Q96IM9 177 aa24.42■■□□□ 1.5
CDC42EP4-203ENST00000578516 GDF15Q99988 308 aa24.42■■□□□ 1.5
CDC42EP4-203ENST00000578516 SEZ6LQ9BYH1 1024 aa24.42■■□□□ 1.5
CDC42EP4-203ENST00000578516 STBD1O95210 358 aa24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 CSF2RAP15509 400 aa24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 CTTNQ14247 550 aaKnown RBP24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 IL17AQ16552 155 aa24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 SERINC5Q86VE9 423 aa24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 LBHD1Q9BQE6 289 aaPredicted RBP24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 OSBPL7Q9BZF2 842 aa24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 PCDHA12Q9UN75 941 aa24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 COLQQ9Y215 455 aaPredicted RBP24.41■■□□□ 1.5
CDC42EP4-203ENST00000578516 A0A087WWV3 80 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 OATP04181 439 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 CTSHP09668 335 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 ACRP10323 421 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 TECP42680 631 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 PLA2G4FQ68DD2 849 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 RDM1Q8NG50 284 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 VWCEQ96DN2 955 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 TUBE1Q9UJT0 475 aa24.4■■□□□ 1.5
CDC42EP4-203ENST00000578516 NRCAMQ92823 1304 aa24.39■■□□□ 1.5
CDC42EP4-203ENST00000578516 PTK7Q13308 1070 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 EPHA7Q15375 998 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 RILPL1Q5EBL4 403 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 TRAF7Q6Q0C0 670 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 BRAPQ7Z569 592 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 EIF2AK1Q9BQI3 630 aaKnown RBP24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 LXNQ9BS40 222 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 FAM49AQ9H0Q0 323 aaPredicted RBP24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 PRO3102Q9H379 93 aa24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 SEPT9Q9UHD8 586 aaPredicted RBP24.39■■□□□ 1.49
CDC42EP4-203ENST00000578516 PTPRSQ13332 1948 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 PP2D1A8MPX8 630 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 ZBTB39O15060 712 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 HBP1O60381 514 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 CKBP12277 381 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 ORC2Q13416 577 aaPredicted RBP24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 C9orf50Q5SZB4 431 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 ZNF618Q5T7W0 954 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 MFSD5Q6N075 450 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 CLIC4Q9Y696 253 aa24.38■■□□□ 1.49
CDC42EP4-203ENST00000578516 MBLAC1A4D2B0 266 aaPredicted RBP24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 THPOP40225 353 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 SLC26A2P50443 739 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 FPGSQ05932 587 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 MBTPS1Q14703 1052 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 FOXD4L6Q3SYB3 417 aaPredicted RBP24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 MTERF2Q49AM1 385 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 FOXD4L3Q6VB84 417 aaPredicted RBP24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 DEFB128Q7Z7B8 93 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 ZNF579Q8NAF0 562 aaKnown RBP24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 DNAJB3Q8WWF6 145 aa24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 BBXQ8WY36 941 aaPredicted RBP24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 UBE2OQ9C0C9 1292 aaKnown RBP24.37■■□□□ 1.49
CDC42EP4-203ENST00000578516 C22orf31O95567 290 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 KLRC1P26715 233 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 PSMC5P62195 406 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 ATP2C1P98194 919 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 CEBPZQ03701 1054 aaKnown RBP24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 TMEM62Q0P6H9 643 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 GPNMBQ14956 572 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 TCTN1Q2MV58 587 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 MTHFD1LQ6UB35 978 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 LRRC8DQ7L1W4 858 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 C16orf59Q7L2K0 433 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 CHAMP1Q96JM3 812 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 PPP1R16BQ96T49 567 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 BMP2KQ9NSY1 1161 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 TRIOBPQ9H2D6 2365 aa24.36■■□□□ 1.49
CDC42EP4-203ENST00000578516 COL1A2P08123 1366 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 MED24O75448 989 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 IQCF3P0C7M6 154 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 GNAT1P11488 350 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 QARSP47897 775 aaKnown RBP24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 NPEPPSP55786 919 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 GRIN1Q05586 938 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 BFSP2Q13515 415 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 SF3A1Q15459 793 aaKnown RBP24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 ANO5Q75V66 913 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 TPH2Q8IWU9 490 aa24.35■■□□□ 1.49
CDC42EP4-203ENST00000578516 GBF1Q92538 1859 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 RRN3P2A6NIE6 340 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 DDX11L8A8MPP1 907 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 PITPNM1O00562 1244 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 SLITRK3O94933 977 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 P4HBP07237 508 aaKnown RBP24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 SELPP16109 830 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 CDC25AP30304 524 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 CLCN3P51790 818 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 RBL2Q08999 1139 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 ZNF484Q5JVG2 852 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 LRRC71Q8N4P6 559 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 RETREG2Q8NC44 543 aa24.34■■□□□ 1.49
CDC42EP4-203ENST00000578516 CAGE1Q8TC20 777 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms