RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 HSP90AA4PQ58FG1 418 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 FAM26FQ5R3K3 315 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 GPAT2Q6NUI2 795 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 TMC6Q7Z403 805 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 FILIP1Q7Z7B0 1213 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 RDM1Q8NG50 284 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 INPP4AQ96PE3 977 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-218ENST00000578469 MPHOSPH6Q99547 160 aaKnown RBP18.81■□□□□ 0.6
SREBF1-218ENST00000578469 BHMT2Q9H2M3 363 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 THAP9Q9H5L6 903 aa18.81■□□□□ 0.6
SREBF1-218ENST00000578469 MAGEC2Q9UBF1 373 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-218ENST00000578469 POTEB2H3BUK9 544 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 FGFR1OPO95684 399 aaKnown RBP18.8■□□□□ 0.6
SREBF1-218ENST00000578469 CTGFP29279 349 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 STXBP2Q15833 593 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-218ENST00000578469 FAM114A1Q8IWE2 563 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 MYOCDQ8IZQ8 938 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 KIAA0895Q8NCT3 520 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 TSG101Q99816 390 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 MOV10L1Q9BXT6 1211 aaKnown RBP18.8■□□□□ 0.6
SREBF1-218ENST00000578469 ZSWIM4Q9H7M6 989 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 NRBP1Q9UHY1 535 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 SLC45A1Q9Y2W3 748 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 SAMM50Q9Y512 469 aa18.8■□□□□ 0.6
SREBF1-218ENST00000578469 WDR64B1ANS9 1081 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 TBCAO75347 108 aaKnown RBP18.79■□□□□ 0.6
SREBF1-218ENST00000578469 CNMDO75829 334 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 FARP2O94887 1054 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-218ENST00000578469 PRKCZQ05513 592 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 GIT2Q14161 759 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 ARSHQ5FYA8 562 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 FOXR2Q6PJQ5 311 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.79■□□□□ 0.6
SREBF1-218ENST00000578469 NAP1L5Q96NT1 182 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-218ENST00000578469 LXNQ9BS40 222 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 ZHX3Q9H4I2 956 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 KCND2Q9NZV8 630 aa18.79■□□□□ 0.6
SREBF1-218ENST00000578469 LIMA1Q9UHB6 759 aaKnown RBP18.79■□□□□ 0.6
SREBF1-218ENST00000578469 RANBP2P49792 3224 aaKnown RBP18.79■□□□□ 0.6
SREBF1-218ENST00000578469 NFASCO94856 1347 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 NPHP3-ACAD11A0A0J9YXS1 232 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 A0A1B0GTH6 734 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 FRMD3A2A2Y4 597 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 TRIM49BA6NDI0 452 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 KCNJ18B7U540 433 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 DKC1O60832 514 aaKnown RBP eCLIP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 EIF3JO75822 258 aaKnown RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 TPM2P07951 284 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 CAPN2P17655 700 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 GAP43P17677 238 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 ERCC3P19447 782 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 EEF1GP26641 437 aaKnown RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 QARSP47897 775 aaKnown RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 KCNJ12Q14500 433 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 CENPPQ6IPU0 288 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 ZNF746Q6NUN9 644 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 VSTM4Q8IW00 320 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 CSGALNACT2Q8N6G5 542 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 CCDC150Q8NCX0 1101 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 PIGOQ8TEQ8 1089 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 U2AF1L4Q8WU68 220 aaKnown RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 HPS3Q969F9 1004 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 ZNF830Q96NB3 372 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 SENP7Q9BQF6 1050 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 SRRTQ9BXP5 876 aaKnown RBP18.78■□□□□ 0.6
SREBF1-218ENST00000578469 MROH8Q9H579 483 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 RBPJLQ9UBG7 517 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 COL4A3BPQ9Y5P4 624 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 SZT2Q5T011 3432 aa18.78■□□□□ 0.6
SREBF1-218ENST00000578469 ARHGEF35A5YM69 484 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 NRDCO43847 1150 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 COBLO75128 1261 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 ALDH5A1P51649 535 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-218ENST00000578469 NR1I3Q14994 352 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 TCP11X2Q5H9J9 407 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 ANKRD40Q6AI12 368 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 RINT1Q6NUQ1 792 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 SHCBP1Q8NEM2 672 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 REEP2Q9BRK0 252 aa18.77■□□□□ 0.6
SREBF1-218ENST00000578469 LRRC10BA6NIK2 292 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 SPATA31C2B4DYI2 1134 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 ATP9AO75110 1047 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 FAM13AO94988 1023 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 LYPLA2O95372 231 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 CYP2C8P10632 490 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 ICAM3P32942 547 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 PMS1P54277 932 aaKnown RBP18.76■□□□□ 0.59
SREBF1-218ENST00000578469 PSMC5P62195 406 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 CCNA1P78396 465 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 RAD51AP2Q09MP3 1159 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 KCTD2Q14681 263 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 KRT31Q15323 416 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 UBE2Q1Q7Z7E8 422 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 CREBRFQ8IUR6 639 aa18.76■□□□□ 0.59
SREBF1-218ENST00000578469 SMAP1Q8IYB5 467 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms