RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 BBXQ8WY36 941 aaPredicted RBP26.05■■□□□ 1.76
LIMD2-204ENST00000578297 VAV3Q9UKW4 847 aa26.05■■□□□ 1.76
LIMD2-204ENST00000578297 SMC3Q9UQE7 1217 aa26.05■■□□□ 1.76
LIMD2-204ENST00000578297 WDR81Q562E7 1941 aa26.05■■□□□ 1.76
LIMD2-204ENST00000578297 RSPH10B2B2RC85 870 aa26.04■■□□□ 1.76
LIMD2-204ENST00000578297 WNT7AO00755 349 aa26.04■■□□□ 1.76
LIMD2-204ENST00000578297 MARCH6O60337 910 aa26.04■■□□□ 1.76
LIMD2-204ENST00000578297 BAG4O95429 457 aaKnown RBP26.04■■□□□ 1.76
LIMD2-204ENST00000578297 RSPH10BP0C881 870 aa26.04■■□□□ 1.76
LIMD2-204ENST00000578297 U2AF2P26368 475 aaKnown RBP eCLIP26.04■■□□□ 1.76
LIMD2-204ENST00000578297 RUFY4Q6ZNE9 571 aa26.04■■□□□ 1.76
LIMD2-204ENST00000578297 COL1A2P08123 1366 aa26.04■■□□□ 1.76
LIMD2-204ENST00000578297 NEMFO60524 1076 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 NBNO60934 754 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 CXCL10P02778 98 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 ZNF484Q5JVG2 852 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 OTOP2Q7RTS6 562 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 TRAPPC12Q8WVT3 735 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 LRCH3Q96II8 777 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 FAM167AQ96KS9 214 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 FTOQ9C0B1 505 aaKnown RBP eCLIP26.03■■□□□ 1.76
LIMD2-204ENST00000578297 MTIF3Q9H2K0 278 aaKnown RBP26.03■■□□□ 1.76
LIMD2-204ENST00000578297 PCDHA2Q9Y5H9 948 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 SZT2Q5T011 3432 aa26.03■■□□□ 1.76
LIMD2-204ENST00000578297 KIF28PB7ZC32 967 aa26.02■■□□□ 1.76
LIMD2-204ENST00000578297 ZNF862O60290 1169 aa26.02■■□□□ 1.76
LIMD2-204ENST00000578297 RPLP2P05387 115 aaKnown RBP26.02■■□□□ 1.76
LIMD2-204ENST00000578297 CALCRLQ16602 461 aa26.02■■□□□ 1.76
LIMD2-204ENST00000578297 FAM26DQ5JW98 314 aa26.02■■□□□ 1.76
LIMD2-204ENST00000578297 RSPH3Q86UC2 560 aa26.02■■□□□ 1.76
LIMD2-204ENST00000578297 ZBTB42B2RXF5 422 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 EML1O00423 815 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 ACTN1P12814 892 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 MBTPS1Q14703 1052 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 UGCGQ16739 394 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 GPR153Q6NV75 609 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 MTHFD1LQ6UB35 978 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 ZBTB10Q96DT7 871 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 NRBP2Q9NSY0 501 aa26.01■■□□□ 1.75
LIMD2-204ENST00000578297 CXXC1Q9P0U4 656 aaPredicted RBP26.01■■□□□ 1.75
LIMD2-204ENST00000578297 TET1Q8NFU7 2136 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 OATP04181 439 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 ATP2B1P20020 1258 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 KLRC1P26715 233 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 TRAPPC10P48553 1259 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 SMAD3P84022 425 aaKnown RBP26■■□□□ 1.75
LIMD2-204ENST00000578297 PRKCEQ02156 737 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 SPIRE1Q08AE8 756 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 ORC2Q13416 577 aaPredicted RBP26■■□□□ 1.75
LIMD2-204ENST00000578297 DNAJB3Q8WWF6 145 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 MTMR9Q96QG7 549 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 PCDHA12Q9UN75 941 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 CEP131Q9UPN4 1083 aa26■■□□□ 1.75
LIMD2-204ENST00000578297 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.99■■□□□ 1.75
LIMD2-204ENST00000578297 SMIM35A0A1B0GVV1 85 aa25.99■■□□□ 1.75
LIMD2-204ENST00000578297 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.99■■□□□ 1.75
LIMD2-204ENST00000578297 CTSHP09668 335 aa25.99■■□□□ 1.75
LIMD2-204ENST00000578297 MCM7P33993 719 aa25.99■■□□□ 1.75
LIMD2-204ENST00000578297 CNKSR3Q6P9H4 555 aa25.99■■□□□ 1.75
LIMD2-204ENST00000578297 TRMT1LQ7Z2T5 733 aaKnown RBP25.99■■□□□ 1.75
LIMD2-204ENST00000578297 NOL7Q9UMY1 257 aaKnown RBP25.99■■□□□ 1.75
LIMD2-204ENST00000578297 H3BQV1 296 aa25.98■■□□□ 1.75
LIMD2-204ENST00000578297 EPHA7Q15375 998 aa25.98■■□□□ 1.75
LIMD2-204ENST00000578297 K7ELQ4 463 aaPredicted RBP25.97■■□□□ 1.75
LIMD2-204ENST00000578297 BAIAP3O94812 1187 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 CHRNA1P02708 482 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 PSMC5P62195 406 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 MGAT3Q09327 533 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 XKR3Q5GH77 459 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 TTC38Q5R3I4 469 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 LARP1BQ659C4 914 aaKnown RBP25.97■■□□□ 1.75
LIMD2-204ENST00000578297 NME8Q8N427 588 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 SNX21Q969T3 373 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 FAM49AQ9H0Q0 323 aaPredicted RBP25.97■■□□□ 1.75
LIMD2-204ENST00000578297 TMEM60Q9H2L4 133 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 TTC12Q9H892 705 aaPredicted RBP25.97■■□□□ 1.75
LIMD2-204ENST00000578297 SLC4A7Q9Y6M7 1214 aa25.97■■□□□ 1.75
LIMD2-204ENST00000578297 ZBBXA8MT70 800 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 STBD1O95210 358 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 C22orf31O95567 290 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 P4HBP07237 508 aaKnown RBP25.96■■□□□ 1.75
LIMD2-204ENST00000578297 TXKP42681 527 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 QARSP47897 775 aaKnown RBP25.96■■□□□ 1.75
LIMD2-204ENST00000578297 ZNF174Q15697 407 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 MCTP1Q6DN14 999 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 NCAPH2Q6IBW4 605 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 BANK1Q8NDB2 785 aa25.96■■□□□ 1.75
LIMD2-204ENST00000578297 INTS4Q96HW7 963 aaKnown RBP25.96■■□□□ 1.75
LIMD2-204ENST00000578297 NIFKQ9BYG3 293 aaKnown RBP25.96■■□□□ 1.75
LIMD2-204ENST00000578297 MAGEB2O15479 319 aa25.95■■□□□ 1.74
LIMD2-204ENST00000578297 DKC1O60832 514 aaKnown RBP eCLIP25.95■■□□□ 1.74
LIMD2-204ENST00000578297 MRPS6P82932 125 aaKnown RBP25.95■■□□□ 1.74
LIMD2-204ENST00000578297 PLEKHG4Q58EX7 1191 aa25.95■■□□□ 1.74
LIMD2-204ENST00000578297 IER5Q5VY09 327 aa25.95■■□□□ 1.74
LIMD2-204ENST00000578297 FAM109BQ6ICB4 259 aaPredicted RBP25.95■■□□□ 1.74
LIMD2-204ENST00000578297 TOB1P50616 345 aaPredicted RBP25.94■■□□□ 1.74
LIMD2-204ENST00000578297 TARBP2Q15633 366 aaKnown RBP25.94■■□□□ 1.74
LIMD2-204ENST00000578297 TCTN1Q2MV58 587 aa25.94■■□□□ 1.74
LIMD2-204ENST00000578297 KIAA0319LQ8IZA0 1049 aa25.94■■□□□ 1.74
LIMD2-204ENST00000578297 OSBPL7Q9BZF2 842 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms