RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SRGNP10124 158 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 CACNB3P54284 484 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 SESN3P58005 492 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 PHLDB2Q86SQ0 1253 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 TRIM6Q9C030 488 aaPredicted RBP11.79□□□□□ -0.52
RNF43-203ENST00000577716 VCX3BQ9H321 246 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 EFCC1Q9HA90 598 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 KMT5AQ9NQR1 393 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
RNF43-203ENST00000577716 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
RNF43-203ENST00000577716 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 USP17L10C9JJH3 530 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 ACSL3O95573 720 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 TNFAIP1Q13829 316 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 C12orf60Q5U649 245 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 MMS22LQ6ZRQ5 1243 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 ARHGEF18Q6ZSZ5 1173 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 ZBTB8OSQ8IWT0 167 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 RIN2Q8WYP3 895 aaPredicted RBP11.79□□□□□ -0.52
RNF43-203ENST00000577716 EDEM3Q9BZQ6 932 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
RNF43-203ENST00000577716 GOLGA8IPA6NC78 632 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 GOLGA8JA6NMD2 632 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 GEN1Q17RS7 908 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 ATP6V0A1Q93050 837 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 COL15A1P39059 1388 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 SGK1O00141 431 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 GCKP35557 465 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 YWHAGP61981 247 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNF43-203ENST00000577716 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
RNF43-203ENST00000577716 KNOP1Q1ED39 458 aaKnown RBP11.78□□□□□ -0.52
RNF43-203ENST00000577716 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 NUGGCQ68CJ6 796 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 RNF34Q969K3 372 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 TRIM11Q96F44 468 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
RNF43-203ENST00000577716 SSX2IPQ9Y2D8 614 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 BAZ2BQ9UIF8 2168 aaKnown RBP11.78□□□□□ -0.52
RNF43-203ENST00000577716 ITSN1Q15811 1721 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 APBA3O96018 575 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 KRT81Q14533 505 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 TMED2Q15363 201 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 TTBK2Q6IQ55 1244 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 PHLDB3Q6NSJ2 640 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 PDXDC1Q6P996 788 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 ELAC2Q9BQ52 826 aaKnown RBP11.78□□□□□ -0.52
RNF43-203ENST00000577716 KIF20BQ96Q89 1820 aa11.78□□□□□ -0.52
RNF43-203ENST00000577716 FAM196BA6NMK8 535 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 TNNC2P02585 160 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 P4HA1P13674 534 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 MAGOHP61326 146 aaKnown RBP11.77□□□□□ -0.52
RNF43-203ENST00000577716 TBC1D9BQ66K14 1250 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 METTL13Q8N6R0 699 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.77□□□□□ -0.52
RNF43-203ENST00000577716 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.52
RNF43-203ENST00000577716 HPSEQ9Y251 543 aa11.77□□□□□ -0.52
RNF43-203ENST00000577716 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 ARHGAP42A6NI28 874 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 GUCY2CP25092 1073 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 POLD1P28340 1107 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 RWDD2BP57060 319 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 ADCY2Q08462 1091 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 ICE2Q659A1 982 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 FOXP4Q8IVH2 680 aaPredicted RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 RAB3IL1Q8TBN0 382 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 CNKSR1Q969H4 720 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 COA1Q9GZY4 146 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 TAF1DQ9H5J8 278 aaPredicted RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 CPSF2Q9P2I0 782 aaKnown RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 MIF4GDA9UHW6 222 aaKnown RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 ZNF211Q13398 564 aaPredicted RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 PSMD6Q15008 389 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 SLC17A8Q8NDX2 589 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 CFAP61Q8NHU2 1237 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 PABPN1LA6NDY0 278 aaKnown RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 H7C0C1 242 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 PODXLO00592 558 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 GH2P01242 217 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 MMEP08473 750 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 INHBAP08476 426 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 ATP5OP48047 213 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 YARSP54577 528 aaKnown RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 GDAP1Q8TB36 358 aa11.77□□□□□ -0.53
RNF43-203ENST00000577716 MRPL47Q9HD33 250 aaKnown RBP11.77□□□□□ -0.53
RNF43-203ENST00000577716 GOLGA8SH3BPF8 625 aa11.76□□□□□ -0.53
RNF43-203ENST00000577716 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms