RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 CCDC142Q17RM4 750 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 TRIM71Q2Q1W2 868 aaKnown RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 CFAP221Q4G0U5 840 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 CEP70Q8NHQ1 597 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 BRF1Q92994 677 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 CATSPER2Q96P56 530 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 NOD2Q9HC29 1040 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 SCINQ9Y6U3 715 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 ZNF521Q96K83 1311 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 VWA3AA6NCI4 1184 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 GIPC2Q8TF65 315 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 LRRC2Q9BYS8 371 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 MMADHCQ9H3L0 296 aaPredicted RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 ZNF148Q9UQR1 794 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 ZDHHC9Q9Y397 364 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 NAA35Q5VZE5 725 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 FOXR1Q6PIV2 292 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 TRIM69Q86WT6 500 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 RBM12BQ8IXT5 1001 aaKnown RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 TBC1D19Q8N5T2 526 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 C7orf31Q8N865 590 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 CTNND2Q9UQB3 1225 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 NSD2O96028 1365 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 E5RI56 91 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 IRAK1P51617 712 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 CCDC144BQ3MJ40 725 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 ATG16L1Q676U5 607 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 TIGD7Q6NT04 549 aaPredicted RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 ECHDC1Q9NTX5 307 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 SNTNA6NMZ2 147 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 APBA3O96018 575 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 CCNA1P78396 465 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 MFSD1Q9H3U5 465 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 MAP3K20Q9NYL2 800 aaKnown RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 STX2P32856 288 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 ART3Q13508 389 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 DLGAP5Q15398 846 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 ANKS6Q68DC2 871 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 DDX17Q92841 729 aaKnown RBP9.47□□□□□ -0.89
CDH8-203ENST00000577390 POTEFA5A3E0 1075 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 PFKFB2O60825 505 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 NCALDP61601 193 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 OR9Q1Q8NGQ5 310 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 ASIC4Q96FT7 647 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 WDR24Q96S15 920 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 BPIFA3Q9BQP9 254 aa9.47□□□□□ -0.89
CDH8-203ENST00000577390 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 PAX3P23760 479 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 SPDYE7PQ495Y7 208 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 CCT8L2Q96SF2 557 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 DNM3Q9UQ16 869 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 ACTN1P12814 892 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 NUP58Q9BVL2 599 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 CASS4Q9NQ75 786 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 TMEM161AQ9NX61 479 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 LAMC1P11047 1609 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 PRR23AA6NEV1 266 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 OSBPP22059 807 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 CYLC2Q14093 348 aaPredicted RBP9.46□□□□□ -0.89
CDH8-203ENST00000577390 TRIM48Q8IWZ4 208 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 MAGEC3Q8TD91 643 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 STAMBPL1Q96FJ0 436 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 FAM107AO95990 144 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 GCLCP48506 637 aaPredicted RBP9.46□□□□□ -0.89
CDH8-203ENST00000577390 CNNM4Q6P4Q7 775 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 PALB2Q86YC2 1186 aa9.46□□□□□ -0.89
CDH8-203ENST00000577390 ATP4AP20648 1035 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 ADCY8P40145 1251 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
CDH8-203ENST00000577390 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 SIKE1Q9BRV8 207 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 EFHD1Q9BUP0 239 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 DCTPP1Q9H773 170 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 SGK1O00141 431 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 FAM200BP0CF97 657 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 SRGAP2CP0DJJ0 459 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 CCZ1BP86790 482 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 CCZ1P86791 482 aaPredicted RBP9.46□□□□□ -0.9
CDH8-203ENST00000577390 LRRC74AQ0VAA2 488 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 SLC9C2Q5TAH2 1124 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 SLC25A24Q6NUK1 477 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 PKN3Q6P5Z2 889 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 C11orf57Q6ZUT1 292 aaPredicted RBP9.46□□□□□ -0.9
CDH8-203ENST00000577390 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.9
CDH8-203ENST00000577390 TMEM165Q9HC07 324 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 ATAD2BQ9ULI0 1458 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 DENND3A2RUS2 1198 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 CCDC130P13994 396 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 SCNN1BP51168 640 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 PSMB7Q99436 277 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 STOML1Q9UBI4 398 aa9.46□□□□□ -0.9
CDH8-203ENST00000577390 A0A1B0GW55 424 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms