RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CCSER1Q9C0I3 900 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 KLC4Q9NSK0 619 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 HAUS2Q9NVX0 235 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 NR3C1P04150 777 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 NSFP46459 744 aaKnown RBP19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 STRN3Q13033 797 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 KCNB1Q14721 858 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 CFAP61Q8NHU2 1237 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 ANAPC5Q9UJX4 755 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 EXOC7Q9UPT5 735 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 PVALEFA0A1B0GWK0 134 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 CIB2O75838 187 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 MDH1P40925 334 aaKnown RBP19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 TRAPPC11Q7Z392 1133 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 VIPAS39Q9H9C1 493 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 PSD3Q9NYI0 1048 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 TTC7AQ9ULT0 858 aaPredicted RBP19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 PIK3C2BO00750 1634 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 CDHR2Q9BYE9 1310 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 UBAP1LF5GYI3 381 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 STAMBPO95630 424 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 POLR2MP0CAP2 368 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 VEGFAP15692 232 aaPredicted RBP19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 RCN2Q14257 317 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 SDCCAG8Q86SQ7 713 aaPredicted RBP19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 MSANTD4Q8NCY6 345 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 RUNDC3BQ96NL0 473 aa19.35■□□□□ 0.69
ATPAF1-214ENST00000576409 HNRNPDLO14979 420 aaKnown RBP19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 TROVE2P10155 538 aaKnown RBP eCLIP19.34■□□□□ 0.694e-8■■■■■ 72
ATPAF1-214ENST00000576409 HERVK_113P62684 666 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 CDC37Q16543 378 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 TMED8Q6PL24 325 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 C1orf112Q9NSG2 853 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 SPATA31A3Q5VYP0 1347 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 DLC1Q96QB1 1528 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 CCDC188H7C350 402 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 FGFR4P22455 802 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 CA4P22748 312 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 DRAP1Q14919 205 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 PARVGQ9HBI0 331 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 PNMA2Q9UL42 364 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 BFSP1Q12934 665 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 SUPT20HQ8NEM7 779 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 ZNF577Q9BSK1 485 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 ACTR5Q9H9F9 607 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
ATPAF1-214ENST00000576409 PNMA6FA0A0J9YX94 578 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 ARL1P40616 181 aaPredicted RBP19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 GRM4Q14833 912 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 BRINP3Q76B58 766 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 CNTNAP5Q8WYK1 1306 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 MXI1P50539 228 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 TAF11Q15544 211 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 SCYL2Q6P3W7 929 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 RSAD2Q8WXG1 361 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 SH3GLB2Q9NR46 395 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 ANKFY1Q9P2R3 1169 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 SALL1Q9NSC2 1324 aa19.33■□□□□ 0.69
ATPAF1-214ENST00000576409 MYOM1P52179 1685 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 A0A087X0T9 212 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 FAM228BP0C875 321 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 GCFC2P16383 781 aaKnown RBP19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 KLRK1P26718 216 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 PSMC4P43686 418 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 C10orf76Q5T2E6 689 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 KIRREL3Q8IZU9 778 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 TSNARE1Q96NA8 513 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 WTIPA6NIX2 430 aaPredicted RBP19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 HNRNPH1P31943 449 aaKnown RBP19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 MTM1Q13496 603 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 CDKAL1Q5VV42 579 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 CD248Q9HCU0 757 aa19.33■□□□□ 0.68
ATPAF1-214ENST00000576409 KIAA1210Q9ULL0 1709 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 GOLGA8SH3BPF8 625 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 ATP2B4P23634 1241 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 SSTR3P32745 418 aaPredicted RBP19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 IL9RQ01113 521 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 NT5C1BQ96P26 610 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 MROH2AA6NES4 1674 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 RCAN1P53805 252 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 TBC1D9BQ66K14 1250 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 PTPRUQ92729 1446 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 TOM1O60784 492 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 RASSF2P50749 326 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 SEPT14Q6ZU15 432 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 ADGRA1Q86SQ6 560 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 IL17RAQ96F46 866 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 PACSIN1Q9BY11 444 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 RAB20Q9NX57 234 aa19.32■□□□□ 0.68
ATPAF1-214ENST00000576409 SGK1O00141 431 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 SLC18A3Q16572 532 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 C12orf60Q5U649 245 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 GJB7Q6PEY0 223 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 C1orf54Q8WWF1 131 aa19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 CDCA7Q9BWT1 371 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-214ENST00000576409 EPN3Q9H201 632 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms