RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MBOAT7Q96N66 472 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 RIT2Q99578 217 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 MTIF3Q9H2K0 278 aaKnown RBP14.98□□□□□ -0.01
RPAIN-216ENST00000575599 UNC45AQ9H3U1 944 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 TUBE1Q9UJT0 475 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 PCDHA10Q9Y5I2 948 aa14.98□□□□□ -0.01
RPAIN-216ENST00000575599 POTEB3A0JP26 581 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 WDR64B1ANS9 1081 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 RBAK-RBAKDNI3L0D1 243 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 GCFC2P16383 781 aaKnown RBP14.97□□□□□ -0.01
RPAIN-216ENST00000575599 SLC26A2P50443 739 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 ADAM17P78536 824 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 POTEBQ6S5H4 581 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 RUFY4Q6ZNE9 571 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 ETNPPLQ8TBG4 499 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 TRAPPC12Q8WVT3 735 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 HERVK_113Q902F9 699 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 TNPO1Q92973 898 aaKnown RBP14.97□□□□□ -0.01
RPAIN-216ENST00000575599 VWCEQ96DN2 955 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 ZBTB10Q96DT7 871 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 NAP1L4Q99733 375 aaKnown RBP14.97□□□□□ -0.01
RPAIN-216ENST00000575599 DISC1Q9NRI5 854 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 CXXC1Q9P0U4 656 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-216ENST00000575599 GABBR1Q9UBS5 961 aa14.97□□□□□ -0.01
RPAIN-216ENST00000575599 SZT2Q5T011 3432 aa14.96□□□□□ -0.01
RPAIN-216ENST00000575599 RSPH10B2B2RC85 870 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 MARCH6O60337 910 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 PSMD10O75832 226 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.02
RPAIN-216ENST00000575599 RSPH10BP0C881 870 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 JAK3P52333 1124 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 PPP4R3AQ6IN85 833 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 TRAF7Q6Q0C0 670 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 MIER3Q7Z3K6 550 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 ATP8B4Q8TF62 1192 aa14.96□□□□□ -0.02
RPAIN-216ENST00000575599 RRN3P2A6NIE6 340 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 K7ELQ4 463 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 NBNO60934 754 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 PARNO95453 639 aaKnown RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 ACTN1P12814 892 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 SFNP31947 248 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 GNL2Q13823 731 aaKnown RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 MBTPS1Q14703 1052 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 MARCH8Q5T0T0 291 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 RASIP1Q5U651 963 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 FAM109BQ6ICB4 259 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 TAF2Q6P1X5 1199 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 IPO9Q96P70 1041 aaKnown RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 FAM49AQ9H0Q0 323 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 KCNMB3Q9NPA1 279 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 MYH9P35579 1960 aaKnown RBP14.95□□□□□ -0.02
RPAIN-216ENST00000575599 IGSF9BQ9UPX0 1349 aa14.95□□□□□ -0.02
RPAIN-216ENST00000575599 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-216ENST00000575599 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-216ENST00000575599 MBLAC1A4D2B0 266 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-216ENST00000575599 GRXCR1A8MXD5 290 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 HBP1O60381 514 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 CAND2O75155 1236 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 ATP2B1P20020 1258 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 ATP4AP20648 1035 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 SMAD3P84022 425 aaKnown RBP14.94□□□□□ -0.02
RPAIN-216ENST00000575599 GPNMBQ14956 572 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 Q7L0L9 218 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 TET1Q8NFU7 2136 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 FBXO18Q8NFZ0 1043 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 DNAJB3Q8WWF6 145 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 KIF3AQ9Y496 699 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 MAFBQ9Y5Q3 323 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-216ENST00000575599 SLC4A7Q9Y6M7 1214 aa14.94□□□□□ -0.02
RPAIN-216ENST00000575599 WDR81Q562E7 1941 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 WNT7AO00755 349 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 CXCL10P02778 98 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 PRKCEQ02156 737 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 UGCGQ16739 394 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 RSPH3Q86UC2 560 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 RDM1Q8NG50 284 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 BBXQ8WY36 941 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-216ENST00000575599 FAM20AQ96MK3 541 aa14.93□□□□□ -0.02
RPAIN-216ENST00000575599 LAMA2P24043 3122 aaKnown RBP14.92□□□□□ -0.02
RPAIN-216ENST00000575599 TBX3O15119 743 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 NEMFO60524 1076 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 OATP04181 439 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 GJB2P29033 226 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 CALCRLQ16602 461 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 ZNF484Q5JVG2 852 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 GPR153Q6NV75 609 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 CNKSR3Q6P9H4 555 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 MTHFD1LQ6UB35 978 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 B3GNT9Q6UX72 402 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 DEFB123Q8N688 67 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 BANK1Q8NDB2 785 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 HAS1Q92839 578 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 FAM167AQ96KS9 214 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 FAM161BQ96MY7 647 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 FOXP1Q9H334 677 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-216ENST00000575599 VAV3Q9UKW4 847 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 COL1A2P08123 1366 aa14.92□□□□□ -0.02
RPAIN-216ENST00000575599 KIF28PB7ZC32 967 aa14.91□□□□□ -0.02
RPAIN-216ENST00000575599 EML1O00423 815 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms