RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TOP1MTQ969P6 601 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 IFIH1Q9BYX4 1025 aaKnown RBP19.79■□□□□ 0.76
SMG6-214ENST00000573827 AGO3Q9H9G7 860 aaKnown RBP19.79■□□□□ 0.76
SMG6-214ENST00000573827 TBC1D22BQ9NU19 505 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 PCDHA4Q9UN74 947 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 MAFBQ9Y5Q3 323 aaPredicted RBP19.79■□□□□ 0.76
SMG6-214ENST00000573827 CDY2AQ9Y6F7 541 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 MYO7AQ13402 2215 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 MSH4O15457 936 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 SEC24BO95487 1268 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 AMHP03971 560 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 USP11P51784 963 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 MRPS6P82932 125 aaKnown RBP19.78■□□□□ 0.76
SMG6-214ENST00000573827 GRB10Q13322 594 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 FAM117BQ6P1L5 589 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 MTHFD1LQ6UB35 978 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 MYOCDQ8IZQ8 938 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 FAM177A1Q8N128 213 aaPredicted RBP19.78■□□□□ 0.76
SMG6-214ENST00000573827 LINC01599Q8WXQ3 324 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 APBB2Q92870 758 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 MBOAT7Q96N66 472 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 ZBED2Q9BTP6 218 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 TRPC6Q9Y210 931 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 TTC3P53804 2025 aa19.78■□□□□ 0.76
SMG6-214ENST00000573827 COL4A4P53420 1690 aaPredicted RBP19.78■□□□□ 0.76
SMG6-214ENST00000573827 CYP3A7-CYP3A51PA0A087WV96 503 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 DTNBO60941 627 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 CYP3A7P24462 503 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 NLRP5P59047 1200 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 CCDC85BQ15834 202 aaPredicted RBP19.77■□□□□ 0.76
SMG6-214ENST00000573827 SWSAP1Q6NVH7 229 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 B3GNT9Q6UX72 402 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 CRIPAKQ8N1N5 446 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 PPM1EQ8WY54 764 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 SLC5A5Q92911 643 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 FAM49AQ9H0Q0 323 aaPredicted RBP19.77■□□□□ 0.76
SMG6-214ENST00000573827 RC3H2Q9HBD1 1191 aaKnown RBP19.77■□□□□ 0.76
SMG6-214ENST00000573827 ZNF302Q9NR11 478 aa19.77■□□□□ 0.76
SMG6-214ENST00000573827 IGSF9BQ9UPX0 1349 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 KDM3AQ9Y4C1 1321 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 SMIM35A0A1B0GVV1 85 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 CPLX1O14810 134 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 HBP1O60381 514 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 LINC00271P0C7V0 271 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 AK2P54819 239 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 KRT76Q01546 638 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 MIS18BP1Q6P0N0 1132 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 RSPH3Q86UC2 560 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 SMAP1Q8IYB5 467 aaPredicted RBP19.76■□□□□ 0.75
SMG6-214ENST00000573827 BLIDQ8IZY5 108 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 TBCKQ8TEA7 893 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 SUGCTQ9HAC7 445 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 INSL6Q9Y581 213 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 WDR81Q562E7 1941 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 STK36Q9NRP7 1315 aa19.76■□□□□ 0.75
SMG6-214ENST00000573827 COL1A2P08123 1366 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 BACH1O14867 736 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 ZNF862O60290 1169 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 RPLP2P05387 115 aaKnown RBP19.75■□□□□ 0.75
SMG6-214ENST00000573827 Q4G0T1 1027 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 FAM160B1Q5W0V3 765 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 PDXDC2PQ6P474 469 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 TSHZ1Q6ZSZ6 1077 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 RTN4RL1Q86UN2 441 aaPredicted RBP19.75■□□□□ 0.75
SMG6-214ENST00000573827 KIAA0319LQ8IZA0 1049 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 GJA10Q969M2 543 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 TGS1Q96RS0 853 aaKnown RBP19.75■□□□□ 0.75
SMG6-214ENST00000573827 PHF20Q9BVI0 1012 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 GJB4Q9NTQ9 266 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 KCNJ14Q9UNX9 436 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 PCDHA10Q9Y5I2 948 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 SQORQ9Y6N5 450 aa19.75■□□□□ 0.75
SMG6-214ENST00000573827 MYH9P35579 1960 aaKnown RBP19.74■□□□□ 0.75
SMG6-214ENST00000573827 ENPP3O14638 875 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 PSMD10O75832 226 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 LARGE1O95461 756 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 TDP2O95551 362 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 C22orf31O95567 290 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 FDPSP14324 419 aaKnown RBP19.74■□□□□ 0.75
SMG6-214ENST00000573827 KLRC1P26715 233 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 CD52P31358 61 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 TMEM62Q0P6H9 643 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 ZNF484Q5JVG2 852 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 GALNT17Q6IS24 598 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 GDPD5Q8WTR4 605 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 TNPO1Q92973 898 aaKnown RBP19.74■□□□□ 0.75
SMG6-214ENST00000573827 RIT2Q99578 217 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 C17orf80Q9BSJ5 609 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 TRPV2Q9Y5S1 764 aa19.74■□□□□ 0.75
SMG6-214ENST00000573827 EVPLQ92817 2033 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 LOXHD1Q8IVV2 1947 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 ME3Q16798 604 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 IER5Q5VY09 327 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 CPLX2Q6PUV4 134 aaKnown RBP19.73■□□□□ 0.75
SMG6-214ENST00000573827 NME8Q8N427 588 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 LINC01465Q8N7H1 131 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 ETNPPLQ8TBG4 499 aa19.73■□□□□ 0.75
SMG6-214ENST00000573827 BBXQ8WY36 941 aaPredicted RBP19.73■□□□□ 0.75
SMG6-214ENST00000573827 CELF4Q9BZC1 486 aaKnown RBP19.73■□□□□ 0.75
SMG6-214ENST00000573827 SLKQ9H2G2 1235 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms