RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 TMX3Q96JJ7 454 aa11.08□□□□□ -0.64
CLN6-209ENST00000569336 FAM20AQ96MK3 541 aa11.08□□□□□ -0.64
CLN6-209ENST00000569336 FTOQ9C0B1 505 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLN6-209ENST00000569336 FOXP1Q9H334 677 aaPredicted RBP11.08□□□□□ -0.64
CLN6-209ENST00000569336 DISC1Q9NRI5 854 aa11.08□□□□□ -0.64
CLN6-209ENST00000569336 MTMR10Q9NXD2 777 aa11.08□□□□□ -0.64
CLN6-209ENST00000569336 CEP131Q9UPN4 1083 aa11.08□□□□□ -0.64
CLN6-209ENST00000569336 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
CLN6-209ENST00000569336 MBLAC1A4D2B0 266 aaPredicted RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 M0QZ92 97 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 CHMP2AO43633 222 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 SLC37A4O43826 429 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 HBP1O60381 514 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 NEMFO60524 1076 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 DTNBO60941 627 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 EFCAB14O75071 495 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 PSMD10O75832 226 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 BAG4O95429 457 aaKnown RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 ACRP10323 421 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 ADAM17P78536 824 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 ZNF200P98182 395 aaPredicted RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 ORC2Q13416 577 aaPredicted RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 TRIM71Q2Q1W2 868 aaKnown RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 SWSAP1Q6NVH7 229 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 MIER3Q7Z3K6 550 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 DEFB128Q7Z7B8 93 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 PCYT2Q99447 389 aa11.07□□□□□ -0.64
CLN6-209ENST00000569336 MAFBQ9Y5Q3 323 aaPredicted RBP11.07□□□□□ -0.64
CLN6-209ENST00000569336 COL4A6Q14031 1691 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 RSPH10B2B2RC85 870 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 BTBD18B2RXH4 712 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 DKC1O60832 514 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLN6-209ENST00000569336 RSPH10BP0C881 870 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 INSRRP14616 1297 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 IGBP1P78318 339 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 GUCY1B3Q02153 619 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 HIC1Q14526 733 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 ZNF484Q5JVG2 852 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 ZNF618Q5T7W0 954 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 RASIP1Q5U651 963 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 C16orf59Q7L2K0 433 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 RPAINQ86UA6 219 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 POTEDQ86YR6 584 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 UIMC1Q96RL1 719 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 UNC45AQ9H3U1 944 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 GABBR1Q9UBS5 961 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 NOL7Q9UMY1 257 aaKnown RBP11.06□□□□□ -0.64
CLN6-209ENST00000569336 SLC4A7Q9Y6M7 1214 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 CITO14578 2027 aa11.06□□□□□ -0.64
CLN6-209ENST00000569336 UNC80Q8N2C7 3258 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.05□□□□□ -0.64
CLN6-209ENST00000569336 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.05□□□□□ -0.64
CLN6-209ENST00000569336 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 EDIL3O43854 480 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
CLN6-209ENST00000569336 CXCL10P02778 98 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 OATP04181 439 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 CTSHP09668 335 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 KCNJ6P48051 423 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 PRKCEQ02156 737 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 CALCRLQ16602 461 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 NOSTRINQ8IVI9 506 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 WNT8BQ93098 351 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
CLN6-209ENST00000569336 SMIM35A0A1B0GVV1 85 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 ABHD14A-ACY1A0A1B0GW23 586 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 H3BQV1 296 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 GJB2P29033 226 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 TRAPPC10P48553 1259 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 MRPS6P82932 125 aaKnown RBP11.04□□□□□ -0.64
CLN6-209ENST00000569336 IKBKEQ14164 716 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 RAB30Q15771 203 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 EARS2Q5JPH6 523 aaKnown RBP11.04□□□□□ -0.64
CLN6-209ENST00000569336 FAM26DQ5JW98 314 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 MARCH8Q5T0T0 291 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 IER5Q5VY09 327 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 FAM109BQ6ICB4 259 aaPredicted RBP11.04□□□□□ -0.64
CLN6-209ENST00000569336 B3GNT9Q6UX72 402 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 NEK9Q8TD19 979 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 SEPT8Q92599 483 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 APBB2Q92870 758 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 VAV3Q9UKW4 847 aa11.04□□□□□ -0.64
CLN6-209ENST00000569336 MAGEB2O15479 319 aa11.03□□□□□ -0.64
CLN6-209ENST00000569336 NBNO60934 754 aa11.03□□□□□ -0.64
CLN6-209ENST00000569336 ATP2A2P16615 1042 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms