RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 NCK2O43639 380 aa7□□□□□ -1.29
CDH13-212ENST00000569144 PRKAB2O43741 272 aa7□□□□□ -1.29
CDH13-212ENST00000569144 KPNA6O60684 536 aa7□□□□□ -1.29
CDH13-212ENST00000569144 SELPP16109 830 aa7□□□□□ -1.29
CDH13-212ENST00000569144 MAP2K3P46734 347 aa7□□□□□ -1.29
CDH13-212ENST00000569144 TYRO3Q06418 890 aa7□□□□□ -1.29
CDH13-212ENST00000569144 RBL2Q08999 1139 aa7□□□□□ -1.29
CDH13-212ENST00000569144 NAA30Q147X3 362 aaPredicted RBP7□□□□□ -1.29
CDH13-212ENST00000569144 COX20Q5RI15 118 aa7□□□□□ -1.29
CDH13-212ENST00000569144 EP400NLQ6ZTU2 488 aa7□□□□□ -1.29
CDH13-212ENST00000569144 LRRC8DQ7L1W4 858 aa7□□□□□ -1.29
CDH13-212ENST00000569144 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
CDH13-212ENST00000569144 RPAINQ86UA6 219 aa7□□□□□ -1.29
CDH13-212ENST00000569144 FAM9BQ8IZU0 186 aa7□□□□□ -1.29
CDH13-212ENST00000569144 FBXL6Q8N531 539 aa7□□□□□ -1.29
CDH13-212ENST00000569144 OR6J1Q8NGC5 347 aa7□□□□□ -1.29
CDH13-212ENST00000569144 WHAMMQ8TF30 809 aa7□□□□□ -1.29
CDH13-212ENST00000569144 COL26A1Q96A83 441 aa7□□□□□ -1.29
CDH13-212ENST00000569144 MYO19Q96H55 970 aa7□□□□□ -1.29
CDH13-212ENST00000569144 WDR11Q9BZH6 1224 aa7□□□□□ -1.29
CDH13-212ENST00000569144 NSUN3Q9H649 340 aaKnown RBP7□□□□□ -1.29
CDH13-212ENST00000569144 CLDND1Q9NY35 253 aa7□□□□□ -1.29
CDH13-212ENST00000569144 LRFN2Q9ULH4 789 aa7□□□□□ -1.29
CDH13-212ENST00000569144 SYNPO2Q9UMS6 1093 aa7□□□□□ -1.29
CDH13-212ENST00000569144 USTQ9Y2C2 406 aa7□□□□□ -1.29
CDH13-212ENST00000569144 INSL6Q9Y581 213 aa7□□□□□ -1.29
CDH13-212ENST00000569144 DDX49Q9Y6V7 483 aaKnown RBP7□□□□□ -1.29
CDH13-212ENST00000569144 MCM3APO60318 1980 aa7□□□□□ -1.29
CDH13-212ENST00000569144 ZBED9Q6R2W3 1325 aa7□□□□□ -1.29
CDH13-212ENST00000569144 RAD50Q92878 1312 aa7□□□□□ -1.29
CDH13-212ENST00000569144 BRWD1Q9NSI6 2320 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 LOC102724159A0A0B4J2E5 919 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 RBM47A0AV96 593 aaKnown RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 H3BNC9 293 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 TGFBR3LH3BV60 316 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 NKRFO15226 690 aaKnown RBP eCLIP6.99□□□□□ -1.29
CDH13-212ENST00000569144 NBNO60934 754 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 MBD4O95243 580 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 LTBRP36941 435 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 HTRA4P83105 476 aaPredicted RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 ATP8B2P98198 1209 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 SFSWAPQ12872 951 aaKnown RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 GPM6BQ13491 265 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 LAMC2Q13753 1193 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 IKBKEQ14164 716 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 PWP2Q15269 919 aaKnown RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 PTGISQ16647 500 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 TCTN1Q2MV58 587 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 C11orf91Q3C1V1 193 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 EPC2Q52LR7 807 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 SESTD1Q86VW0 696 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 RPAP2Q8IXW5 612 aaPredicted RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 GMCL1P1Q8NEA9 526 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 PPP1R13LQ8WUF5 828 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 ATOH1Q92858 354 aaPredicted RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 MKL1Q969V6 931 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 CTAGE1Q96RT6 745 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 SAP130Q9H0E3 1048 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 BRD7Q9NPI1 651 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 CYP39A1Q9NYL5 469 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 MARK1Q9P0L2 795 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 MYH8P13535 1937 aa6.99□□□□□ -1.29
CDH13-212ENST00000569144 GREB1LQ9C091 1923 aaPredicted RBP6.99□□□□□ -1.29
CDH13-212ENST00000569144 IGKV6D-41A0A0C4DH26 115 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 STXBP3O00186 592 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 BCAR3O75815 825 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 BMP3P12645 472 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 ALAS1P13196 640 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 SCNN1AP37088 669 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 ALDH5A1P51649 535 aaPredicted RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 STAT2P52630 851 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 RARSP54136 660 aaKnown RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 ZXDAP98168 799 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 SMAD4Q13485 552 aaKnown RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 IER5Q5VY09 327 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 ZNF385CQ66K41 422 aaPredicted RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 CTR9Q6PD62 1173 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 LYPD4Q6UWN0 246 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 AACSQ86V21 672 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 FAM160B2Q86V87 743 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 TRMT2AQ8IZ69 625 aaKnown RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 SVOPQ8N4V2 548 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 DHX38Q92620 1227 aaKnown RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 ARPP21Q9UBL0 812 aaPredicted RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 ADD3Q9UEY8 706 aaKnown RBP6.98□□□□□ -1.29
CDH13-212ENST00000569144 SCN10AQ9Y5Y9 1956 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 C5orf42Q9H799 3197 aa6.98□□□□□ -1.29
CDH13-212ENST00000569144 COL4A6Q14031 1691 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 PRR23AA6NEV1 266 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 TMEM232C9JQI7 657 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 GOLIM4O00461 696 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 ANP32CO43423 234 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 TECTAO75443 2155 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 AMHP03971 560 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 CKBP12277 381 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 TRIM27P14373 513 aa6.97□□□□□ -1.29
CDH13-212ENST00000569144 AVPR2P30518 371 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms