RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 FDPSP14324 419 aaKnown RBP22.97■■□□□ 1.27
CLK3-225ENST00000569063 ATP4AP20648 1035 aa22.97■■□□□ 1.27
CLK3-225ENST00000569063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.97■■□□□ 1.275e-12■■□□□ 14.3
CLK3-225ENST00000569063 TRAPPC12Q8WVT3 735 aa22.97■■□□□ 1.27
CLK3-225ENST00000569063 ZBTB10Q96DT7 871 aa22.97■■□□□ 1.27
CLK3-225ENST00000569063 MBOAT7Q96N66 472 aa22.97■■□□□ 1.27
CLK3-225ENST00000569063 GAS2L1Q99501 681 aaPredicted RBP22.97■■□□□ 1.27
CLK3-225ENST00000569063 PTPRSQ13332 1948 aa22.97■■□□□ 1.27
CLK3-225ENST00000569063 EYSQ5T1H1 3165 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 WDR64B1ANS9 1081 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 DTNBO60941 627 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 MTHFD1LQ6UB35 978 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 TMCO2Q7Z6W1 182 aaPredicted RBP22.96■■□□□ 1.27
CLK3-225ENST00000569063 RAD9AQ99638 391 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 ZBED2Q9BTP6 218 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 IFIH1Q9BYX4 1025 aaKnown RBP22.96■■□□□ 1.27
CLK3-225ENST00000569063 GJB4Q9NTQ9 266 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 COL1A2P08123 1366 aa22.96■■□□□ 1.27
CLK3-225ENST00000569063 GAS7O60861 476 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 TDP2O95551 362 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 AMHP03971 560 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 MRPS6P82932 125 aaKnown RBP22.95■■□□□ 1.26
CLK3-225ENST00000569063 TAP1Q03518 808 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 INF2Q27J81 1249 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 ZNF484Q5JVG2 852 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 IER5Q5VY09 327 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 NME8Q8N427 588 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 NSUN7Q8NE18 718 aaKnown RBP22.95■■□□□ 1.26
CLK3-225ENST00000569063 BBXQ8WY36 941 aaPredicted RBP22.95■■□□□ 1.26
CLK3-225ENST00000569063 FAM49AQ9H0Q0 323 aaPredicted RBP22.95■■□□□ 1.26
CLK3-225ENST00000569063 SAMM50Q9Y512 469 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 CDY2AQ9Y6F7 541 aa22.95■■□□□ 1.26
CLK3-225ENST00000569063 CHD7Q9P2D1 2997 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 CCDC194A0A1B0GVG4 234 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 SMIM35A0A1B0GVV1 85 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 ZBTB42B2RXF5 422 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 PSMD10O75832 226 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 KLRC1P26715 233 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 SFNP31947 248 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 LPIN1Q14693 890 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 LRCH2Q5VUJ6 765 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 TEKT3Q9BXF9 490 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 DISC1Q9NRI5 854 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 GABBR1Q9UBS5 961 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 SQORQ9Y6N5 450 aa22.94■■□□□ 1.26
CLK3-225ENST00000569063 IGSF9BQ9UPX0 1349 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 ARHGEF15O94989 841 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 GHRP10912 638 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 ADGRE1Q14246 886 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 FBXO47Q5MNV8 452 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 CKAP2LQ8IYA6 745 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 ETNPPLQ8TBG4 499 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 OXER1Q8TDS5 423 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 KIF2CQ99661 725 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 LIMCH1Q9UPQ0 1083 aa22.93■■□□□ 1.26
CLK3-225ENST00000569063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.92■■□□□ 1.26
CLK3-225ENST00000569063 LCHNA4D1U4 455 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 M0QZ92 97 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 JAK3P52333 1124 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 LETM2Q2VYF4 491 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 PPP4R3AQ6IN85 833 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 B3GNT9Q6UX72 402 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 TSHZ1Q6ZSZ6 1077 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 NEK8Q86SG6 692 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 USP38Q8NB14 1042 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 RDM1Q8NG50 284 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 GJA10Q969M2 543 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 TOP1MTQ969P6 601 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 UNC45AQ9H3U1 944 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 DDX25Q9UHL0 483 aaKnown RBP22.92■■□□□ 1.26
CLK3-225ENST00000569063 INSL6Q9Y581 213 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 MICAL3Q7RTP6 2002 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 SIP14410 1827 aa22.92■■□□□ 1.26
CLK3-225ENST00000569063 KDM3AQ9Y4C1 1321 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 HTRA4P83105 476 aaPredicted RBP22.91■■□□□ 1.26
CLK3-225ENST00000569063 ST3GAL1Q11201 340 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 PIK3AP1Q6ZUJ8 805 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 MYOCDQ8IZQ8 938 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 FAM167AQ96KS9 214 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 CELF4Q9BZC1 486 aaKnown RBP22.91■■□□□ 1.26
CLK3-225ENST00000569063 CEP131Q9UPN4 1083 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 TRPV2Q9Y5S1 764 aa22.91■■□□□ 1.26
CLK3-225ENST00000569063 CHMP2AO43633 222 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 SLC37A4O43826 429 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 JAK2O60674 1132 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 C22orf31O95567 290 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 GCFC2P16383 781 aaKnown RBP22.9■■□□□ 1.26
CLK3-225ENST00000569063 KRT2P35908 639 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 TMEM62Q0P6H9 643 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 FAM117BQ6P1L5 589 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 KIAA0319LQ8IZA0 1049 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 TNFRSF25Q93038 417 aa22.9■■□□□ 1.26
CLK3-225ENST00000569063 NAP1L4Q99733 375 aaKnown RBP22.9■■□□□ 1.26
CLK3-225ENST00000569063 AGO3Q9H9G7 860 aaKnown RBP22.9■■□□□ 1.26
CLK3-225ENST00000569063 ZNF862O60290 1169 aa22.89■■□□□ 1.25
CLK3-225ENST00000569063 IGFBP4P22692 258 aa22.89■■□□□ 1.25
CLK3-225ENST00000569063 RBM25P49756 843 aaKnown RBP22.89■■□□□ 1.25
CLK3-225ENST00000569063 EARS2Q5JPH6 523 aaKnown RBP22.89■■□□□ 1.25
CLK3-225ENST00000569063 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.89■■□□□ 1.25
CLK3-225ENST00000569063 FAM20AQ96MK3 541 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms