RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 PDCD2LQ9BRP1 358 aa17.12■□□□□ 0.33
CDH16-207ENST00000568632 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
CDH16-207ENST00000568632 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
CDH16-207ENST00000568632 ADD3Q9UEY8 706 aaKnown RBP17.12■□□□□ 0.33
CDH16-207ENST00000568632 SYF2O95926 243 aaKnown RBP17.11■□□□□ 0.33
CDH16-207ENST00000568632 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 PDIA5Q14554 519 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 MTRQ99707 1265 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 ACBD3Q9H3P7 528 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 MEIS1O00470 390 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
CDH16-207ENST00000568632 CPP00450 1065 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 ARHGAP25P42331 645 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 AMPD2Q01433 879 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 SPIRE1Q08AE8 756 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 RASAL3Q86YV0 1011 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 SNX29Q8TEQ0 813 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
CDH16-207ENST00000568632 TBX3O15119 743 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 RNF40O75150 1001 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 CASP14P31944 242 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 RABGAP1Q9Y3P9 1069 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDH16-207ENST00000568632 ECM1Q16610 540 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 NCAPH2Q6IBW4 605 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 BLZF1Q9H2G9 400 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 KCNH7Q9NS40 1196 aa17.1■□□□□ 0.33
CDH16-207ENST00000568632 ASTN1O14525 1302 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 GYPCP04921 128 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 ERVK-24P63145 666 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 GRB10Q13322 594 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 KRT79Q5XKE5 535 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 CCDC51Q96ER9 411 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 PORCNQ9H237 461 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 MYO1AQ9UBC5 1043 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 VAV3Q9UKW4 847 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 TESPA1A2RU30 521 aaPredicted RBP17.09■□□□□ 0.33
CDH16-207ENST00000568632 CHMP2AO43633 222 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 NR3C2P08235 984 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 FSTL1Q12841 308 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 RGMBQ6NW40 437 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 SH3RF1Q7Z6J0 888 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 ANKRD23Q86SG2 305 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 NSUN6Q8TEA1 469 aaKnown RBP17.09■□□□□ 0.33
CDH16-207ENST00000568632 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 MYO6Q9UM54 1294 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 LCTP09848 1927 aa17.09■□□□□ 0.33
CDH16-207ENST00000568632 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.33
CDH16-207ENST00000568632 PGK2P07205 417 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 MTMR1Q13613 665 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 CUL4BQ13620 913 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 CT47A1Q5JQC4 288 aaPredicted RBP17.08■□□□□ 0.33
CDH16-207ENST00000568632 KANK3Q6NY19 840 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 CNGA4Q8IV77 575 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 AFAP1L1Q8TED9 768 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 SLC5A5Q92911 643 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 FBXO40Q9UH90 709 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.33
CDH16-207ENST00000568632 UBIAD1Q9Y5Z9 338 aa17.08■□□□□ 0.33
CDH16-207ENST00000568632 IPO5O00410 1097 aaKnown RBP17.08■□□□□ 0.32
CDH16-207ENST00000568632 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
CDH16-207ENST00000568632 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.32
CDH16-207ENST00000568632 DNAJC21Q5F1R6 531 aaKnown RBP17.08■□□□□ 0.32
CDH16-207ENST00000568632 KCNK18Q7Z418 384 aa17.08■□□□□ 0.32
CDH16-207ENST00000568632 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
CDH16-207ENST00000568632 TMTC1Q8IUR5 882 aa17.08■□□□□ 0.32
CDH16-207ENST00000568632 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
CDH16-207ENST00000568632 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.32
CDH16-207ENST00000568632 EML1O00423 815 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 GAS7O60861 476 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 PSMD10O75832 226 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 CCT6AP40227 531 aaKnown RBP17.07■□□□□ 0.32
CDH16-207ENST00000568632 GRM1Q13255 1194 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 PYM1Q9BRP8 204 aaKnown RBP17.07■□□□□ 0.32
CDH16-207ENST00000568632 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 PFASO15067 1338 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 POTEB3A0JP26 581 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 STX17P56962 302 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 POTEBQ6S5H4 581 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 OTOP1Q7RTM1 612 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 SUGP1Q8IWZ8 645 aaKnown RBP17.07■□□□□ 0.32
CDH16-207ENST00000568632 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
CDH16-207ENST00000568632 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms