RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	COL1A2	P08123	1366 aa		13.44	□□□□□ -0.26
FANCA-231	ENST00000568626	MKI67	P46013	3256 aa	Known RBP	13.44	□□□□□ -0.26
FANCA-231	ENST00000568626		A0A1W2PQ45	241 aa	Predicted RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626		A0A1W2PQY0	241 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	POTEB3	A0JP26	581 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	HAS3	O00219	553 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	MED24	O75448	989 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	SPATA31C1	P0DKV0	1188 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	XRCC6	P12956	609 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	PSEN2	P49810	448 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	IRX5	P78411	483 aa	Predicted RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	PTPN11	Q06124	597 aa	Predicted RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	CTTN	Q14247	550 aa	Known RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	UGCG	Q16739	394 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	XKR3	Q5GH77	459 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	POTEB	Q6S5H4	581 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	SHC4	Q6S5L8	630 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	CCDC73	Q6ZRK6	1079 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	CATSPER3	Q86XQ3	398 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	TPH2	Q8IWU9	490 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	CKAP2L	Q8IYA6	745 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	MRPS27	Q92552	414 aa	Known RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	KAT2B	Q92831	832 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	CCDC43	Q96MW1	224 aa	Known RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	NACC1	Q96RE7	527 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	MMTAG2	Q9BU76	263 aa	Known RBP	13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	STARD7	Q9NQZ5	370 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	NRBP2	Q9NSY0	501 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	RGL1	Q9NZL6	768 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	TRPC6	Q9Y210	931 aa		13.43	□□□□□ -0.26
FANCA-231	ENST00000568626	ARID2	Q68CP9	1835 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	BRCA2	P51587	3418 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626		A0A0U1RQG5	324 aa	Predicted RBP	13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	FAM237A	A0A1B0GTK4	181 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	ZNF862	O60290	1169 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	HBP1	O60381	514 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	CDC25A	P30304	524 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	YWHAB	P31946	246 aa	Known RBP	13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	PLCB4	Q15147	1175 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	KIAA0753	Q2KHM9	967 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	TMEM119	Q4V9L6	283 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	NFRKB	Q6P4R8	1299 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	POTEG	Q6S5H5	508 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	OTUD6A	Q7L8S5	288 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	SESTD1	Q86VW0	696 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	EPSTI1	Q96J88	318 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	ANKEF1	Q9NU02	776 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	STK17A	Q9UEE5	414 aa		13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.42	□□□□□ -0.26
FANCA-231	ENST00000568626	COL6A1	P12109	1028 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	MARK3	P27448	753 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	UBE2H	P62256	183 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	PPFIA1	Q13136	1202 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	KARS	Q15046	597 aa	Known RBP	13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	ZRSR1	Q15695	479 aa	Known RBP	13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	ZNF484	Q5JVG2	852 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	SPECC1	Q5M775	1068 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	PRPF38B	Q5VTL8	546 aa	Known RBP	13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	NECAB2	Q7Z6G3	386 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	EXOC8	Q8IYI6	725 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	C7orf31	Q8N865	590 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	FSIP1	Q8NA03	581 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	NIFK	Q9BYG3	293 aa	Known RBP	13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	CUEDC2	Q9H467	287 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	MAGEF1	Q9HAY2	307 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	DDX19A	Q9NUU7	478 aa	Known RBP	13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	DBR1	Q9UK59	544 aa	Known RBP	13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	KIAA1024	Q9UPX6	916 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	DNM3	Q9UQ16	869 aa		13.41	□□□□□ -0.26
FANCA-231	ENST00000568626	MROH7	Q68CQ1	1323 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	NRCAM	Q92823	1304 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	RRN3P2	A6NIE6	340 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	GNAT1	P11488	350 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	PFKFB1	P16118	471 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	PLCG1	P19174	1290 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	ATP4A	P20648	1035 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	STAT6	P42226	847 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	MNX1	P50219	401 aa	Predicted RBP	13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	GRB10	Q13322	594 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	ITGA7	Q13683	1181 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	RRAGB	Q5VZM2	374 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	USP49	Q70CQ1	688 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	IQUB	Q8NA54	791 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	VTI1A	Q96AJ9	217 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	CCDC34	Q96HJ3	373 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	PNMA5	Q96PV4	448 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	JPH2	Q9BR39	696 aa	Predicted RBP	13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	C11orf49	Q9H6J7	331 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	USP25	Q9UHP3	1055 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	KCNH3	Q9ULD8	1083 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	HPSE	Q9Y251	543 aa		13.4	□□□□□ -0.26
FANCA-231	ENST00000568626	DDX11L8	A8MPP1	907 aa		13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	STBD1	O95210	358 aa		13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	EYA4	O95677	639 aa		13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	RPLP2	P05387	115 aa	Known RBP	13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	SMIM10L2A	P0DMW4	78 aa		13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	SMIM10L2B	P0DMW5	78 aa		13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	PTMS	P20962	102 aa		13.39	□□□□□ -0.27
FANCA-231	ENST00000568626	HOXC8	P31273	242 aa		13.39	□□□□□ -0.27

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