RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PRO3102Q9H379 93 aa19.37■□□□□ 0.69
COMMD4-220ENST00000567720 TTC12Q9H892 705 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-220ENST00000567720 TUBE1Q9UJT0 475 aa19.37■□□□□ 0.69
COMMD4-220ENST00000567720 COL1A2P08123 1366 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 MICAL3Q7RTP6 2002 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 MBLAC1A4D2B0 266 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-220ENST00000567720 ZBTB42B2RXF5 422 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 PITPNM1O00562 1244 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 OATP04181 439 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 IGBP1P78318 339 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 WRAP73Q9P2S5 460 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-220ENST00000567720 PCDHA12Q9UN75 941 aa19.36■□□□□ 0.69
COMMD4-220ENST00000567720 GBF1Q92538 1859 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 RBAK-RBAKDNI3L0D1 243 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 CCL23P55773 120 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 PTGDRQ13258 359 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 MFSD5Q6N075 450 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 RUFY4Q6ZNE9 571 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 CKAP2LQ8IYA6 745 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 CAGE1Q8TC20 777 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 BBXQ8WY36 941 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-220ENST00000567720 FAM167AQ96KS9 214 aa19.35■□□□□ 0.69
COMMD4-220ENST00000567720 LBHD1Q9BQE6 289 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-220ENST00000567720 TMEM150BA6NC51 233 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 HBP1O60381 514 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 STBD1O95210 358 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 GNAT1P11488 350 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 EPHB4P54760 987 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 CYP4A11Q02928 519 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 PKP1Q13835 747 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 EPHA7Q15375 998 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 FAM173BQ6P4H8 233 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 TRAF7Q6Q0C0 670 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 TRMT1LQ7Z2T5 733 aaKnown RBP19.34■□□□□ 0.69
COMMD4-220ENST00000567720 CCDC155Q8N6L0 562 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 SCLYQ96I15 445 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 LXNQ9BS40 222 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 FTOQ9C0B1 505 aaKnown RBP eCLIP19.34■□□□□ 0.69
COMMD4-220ENST00000567720 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
COMMD4-220ENST00000567720 RRN3P2A6NIE6 340 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 CKBP12277 381 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 CSF2RAP15509 400 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 ATP2C1P98194 919 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-220ENST00000567720 FPGSQ05932 587 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 BFSP2Q13515 415 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 VWCEQ96DN2 955 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 DYDC2Q96IM9 177 aa19.33■□□□□ 0.68
COMMD4-220ENST00000567720 EIF2AK1Q9BQI3 630 aaKnown RBP19.33■□□□□ 0.68
COMMD4-220ENST00000567720 SEPT9Q9UHD8 586 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-220ENST00000567720 TCHHQ07283 1943 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 LAD1O00515 517 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 C22orf31O95567 290 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 P4HBP07237 508 aaKnown RBP19.32■□□□□ 0.68
COMMD4-220ENST00000567720 TECP42680 631 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 QARSP47897 775 aaKnown RBP19.32■□□□□ 0.68
COMMD4-220ENST00000567720 FXR2P51116 673 aaKnown RBP eCLIP19.32■□□□□ 0.68
COMMD4-220ENST00000567720 PSMC5P62195 406 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 IL17AQ16552 155 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 LRRC8DQ7L1W4 858 aa19.32■□□□□ 0.68
COMMD4-220ENST00000567720 COLQQ9Y215 455 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-220ENST00000567720 CTSHP09668 335 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 IQCF3P0C7M6 154 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 SELPP16109 830 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 BMP8BP34820 402 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 THPOP40225 353 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 PRPHP41219 470 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 CTTNQ14247 550 aaKnown RBP19.31■□□□□ 0.68
COMMD4-220ENST00000567720 BECN1Q14457 450 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 MBTPS1Q14703 1052 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 ZNF484Q5JVG2 852 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 ZNF618Q5T7W0 954 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 PLA2G4FQ68DD2 849 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 TAF2Q6P1X5 1199 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 MTHFD1LQ6UB35 978 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 TMEM199Q8N511 208 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 NEK9Q8TD19 979 aa19.31■□□□□ 0.68
COMMD4-220ENST00000567720 TNPO1Q92973 898 aaKnown RBP19.31■□□□□ 0.68
COMMD4-220ENST00000567720 UBE2OQ9C0C9 1292 aaKnown RBP19.31■□□□□ 0.68
COMMD4-220ENST00000567720 PPIGQ13427 754 aaKnown RBP eCLIP19.3■□□□□ 0.681e-6■■■■■ 27.9
COMMD4-220ENST00000567720 TARBP2Q15633 366 aaKnown RBP19.3■□□□□ 0.68
COMMD4-220ENST00000567720 TMEM266Q2M3C6 531 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 XKR3Q5GH77 459 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 FOXD4L5Q5VV16 416 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-220ENST00000567720 ANO5Q75V66 913 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 IGSF22Q8N9C0 903 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 FOXD4L4Q8WXT5 416 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-220ENST00000567720 CEP89Q96ST8 783 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 HSD17B14Q9BPX1 270 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 SH2D3AQ9BRG2 576 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 FAM49AQ9H0Q0 323 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-220ENST00000567720 CEP131Q9UPN4 1083 aa19.3■□□□□ 0.68
COMMD4-220ENST00000567720 CAND2O75155 1236 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 MED24O75448 989 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 SLITRK3O94933 977 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-220ENST00000567720 KLRC1P26715 233 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 GPNMBQ14956 572 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 SF3A1Q15459 793 aaKnown RBP19.29■□□□□ 0.68
COMMD4-220ENST00000567720 MTERF2Q49AM1 385 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 C9orf50Q5SZB4 431 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms