RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 COG2Q14746 738 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 RNF207Q6ZRF8 634 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 C1orf186Q6ZWK4 172 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 SFR1Q86XK3 245 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 RUSC1Q9BVN2 902 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 HOMER2Q9NSB8 354 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 TRAF3IP3Q9Y228 551 aa25.66■■□□□ 1.7
LINC00543-201ENST00000567234 ATP2A1O14983 1001 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 HMGCS2P54868 508 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 ERVK-24P63145 666 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 MRPS9P82933 396 aaKnown RBP25.65■■□□□ 1.7
LINC00543-201ENST00000567234 ZBED6P86452 979 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 MYPNQ86TC9 1320 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 IL31RAQ8NI17 732 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 AGO4Q9HCK5 861 aaKnown RBP25.65■■□□□ 1.7
LINC00543-201ENST00000567234 TMOD4Q9NZQ9 345 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 RASSF10A6NK89 507 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 TUBB4BP68371 445 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 PGM5Q15124 567 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 MEA1Q16626 185 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.65■■□□□ 1.7
LINC00543-201ENST00000567234 TAAR1Q96RJ0 339 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 DESI2Q9BSY9 194 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 RRAGCQ9HB90 399 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 TBC1D22BQ9NU19 505 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 SEL1LQ9UBV2 794 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 AFG3L2Q9Y4W6 797 aa25.65■■□□□ 1.7
LINC00543-201ENST00000567234 DHX15O43143 795 aaKnown RBP25.64■■□□□ 1.7
LINC00543-201ENST00000567234 TADA3O75528 432 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 KNOP1Q1ED39 458 aaKnown RBP25.64■■□□□ 1.7
LINC00543-201ENST00000567234 SH3D19Q5HYK7 790 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 CATSPERGQ6ZRH7 1159 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 RBM46Q8TBY0 533 aaKnown RBP25.64■■□□□ 1.7
LINC00543-201ENST00000567234 PIGOQ8TEQ8 1089 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 ZC3H15Q8WU90 426 aaKnown RBP25.64■■□□□ 1.7
LINC00543-201ENST00000567234 PXMP2Q9NR77 195 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 RNF146Q9NTX7 359 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 FEZ2Q9UHY8 353 aaPredicted RBP25.64■■□□□ 1.7
LINC00543-201ENST00000567234 SIK3Q9Y2K2 1263 aa25.64■■□□□ 1.7
LINC00543-201ENST00000567234 ERICH4A6NGS2 130 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 PDXKO00764 312 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 MTMR1Q13613 665 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 SLC30A10Q6XR72 485 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 NELFCDQ8IXH7 590 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 GPR161Q8N6U8 529 aaKnown RBP25.63■■□□□ 1.69
LINC00543-201ENST00000567234 RMDN3Q96TC7 470 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.63■■□□□ 1.69
LINC00543-201ENST00000567234 ODF2LQ9ULJ1 636 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 MYH11P35749 1972 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 OTOFQ9HC10 1997 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 CCDC40Q4G0X9 1142 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 MIER3Q7Z3K6 550 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 MNS1Q8NEH6 495 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 ZNF526Q8TF50 670 aaPredicted RBP25.63■■□□□ 1.69
LINC00543-201ENST00000567234 ZFP91Q96JP5 570 aaPredicted RBP25.63■■□□□ 1.69
LINC00543-201ENST00000567234 PCMTD1Q96MG8 357 aaPredicted RBP25.63■■□□□ 1.69
LINC00543-201ENST00000567234 PDCD2LQ9BRP1 358 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 LXNQ9BS40 222 aa25.63■■□□□ 1.69
LINC00543-201ENST00000567234 CETN3O15182 167 aa25.62■■□□□ 1.69
LINC00543-201ENST00000567234 EIF3DO15371 548 aaKnown RBP eCLIP25.62■■□□□ 1.69
LINC00543-201ENST00000567234 USP2O75604 605 aaPredicted RBP25.62■■□□□ 1.69
LINC00543-201ENST00000567234 P4HBP07237 508 aaKnown RBP25.62■■□□□ 1.69
LINC00543-201ENST00000567234 CDK17Q00537 523 aa25.62■■□□□ 1.69
LINC00543-201ENST00000567234 EXOC4Q96A65 974 aa25.62■■□□□ 1.69
LINC00543-201ENST00000567234 EDEM3Q9BZQ6 932 aa25.62■■□□□ 1.69
LINC00543-201ENST00000567234 ZNHIT6Q9NWK9 470 aaKnown RBP25.62■■□□□ 1.69
LINC00543-201ENST00000567234 HOXC10Q9NYD6 342 aa25.62■■□□□ 1.69
LINC00543-201ENST00000567234 ZNF214Q9UL59 606 aaPredicted RBP25.62■■□□□ 1.69
LINC00543-201ENST00000567234 FAM184BQ9ULE4 1060 aa25.62■■□□□ 1.69
LINC00543-201ENST00000567234 PAPPA2Q9BXP8 1791 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 NKRFO15226 690 aaKnown RBP eCLIP25.61■■□□□ 1.69
LINC00543-201ENST00000567234 CALUO43852 315 aaPredicted RBP25.61■■□□□ 1.69
LINC00543-201ENST00000567234 FAM13AO94988 1023 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 CASP5P51878 434 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 ZNF131P52739 623 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 ADAM9Q13443 819 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 PNMA8AQ86V59 439 aaPredicted RBP25.61■■□□□ 1.69
LINC00543-201ENST00000567234 CDCA5Q96FF9 252 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 WNK4Q96J92 1243 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 ZSWIM4Q9H7M6 989 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 MRPL44Q9H9J2 332 aaKnown RBP25.61■■□□□ 1.69
LINC00543-201ENST00000567234 CLEC11AQ9Y240 323 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 PTPRFP10586 1907 aa25.61■■□□□ 1.69
LINC00543-201ENST00000567234 RSPH10B2B2RC85 870 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 RSPH10BP0C881 870 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 EIF2AK2P19525 551 aaKnown RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 GUCY2CP25092 1073 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 ARHGEF16Q5VV41 709 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 SNRNP48Q6IEG0 339 aaKnown RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 NSMFQ6X4W1 530 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 TRIM59Q8IWR1 403 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 PARVGQ9HBI0 331 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 AGPAT5Q9NUQ2 364 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 TYW1Q9NV66 732 aaKnown RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 WRAP73Q9P2S5 460 aaPredicted RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 RIPK3Q9Y572 518 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 EPN1Q9Y6I3 576 aaPredicted RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 UBE4BO95155 1302 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 LYPLA2O95372 231 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 HNRNPH3P31942 346 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms