RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 CHMP2AO43633 222 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 TLL1O43897 1013 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 LGR5O75473 907 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 BAIAP3O94812 1187 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 MBTPS1Q14703 1052 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 NTRK3Q16288 839 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 HERC6Q8IVU3 1022 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 CKAP2LQ8IYA6 745 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 MYOCDQ8IZQ8 938 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 BICD2Q8TD16 824 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 EPAS1Q99814 870 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 ZNF577Q9BSK1 485 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 AGXT2Q9BYV1 514 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 ZMYND12Q9H0C1 365 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 SAMM50Q9Y512 469 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 PCDHA11Q9Y5I1 949 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 KIAA1671Q9BY89 1806 aa11.49□□□□□ -0.57
GTF3C1-206ENST00000566779 KIF28PB7ZC32 967 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 RBL2Q08999 1139 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 TMEM62Q0P6H9 643 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 IKBKEQ14164 716 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 GPNMBQ14956 572 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 FAM160B1Q5W0V3 765 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 ARNTL2Q8WYA1 636 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 SEPT8Q92599 483 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 PPP1R16BQ96T49 567 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 NFASCO94856 1347 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 EMSYQ7Z589 1322 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 NRCAMQ92823 1304 aa11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 PRRC2BQ5JSZ5 2229 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-206ENST00000566779 LAMA2P24043 3122 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 RFXAPO00287 272 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 IPO5O00410 1097 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 MEIS1O00470 390 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 CDKL5O76039 1030 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 UPP2O95045 317 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 DEXIO95424 95 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 PARNO95453 639 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 CCNE2O96020 404 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 AMHP03971 560 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 GHRP10912 638 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 INSRRP14616 1297 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 STAT5BP51692 787 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 AK2P54819 239 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 SCRN1Q12765 414 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 PLCB4Q15147 1175 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 RSPH3Q86UC2 560 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 NECAB1Q8N987 351 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 DBF4BQ8NFT6 615 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 DNAJB3Q8WWF6 145 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 GJA10Q969M2 543 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 ZNF274Q96GC6 653 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 PCYT2Q99447 389 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 CDHR5Q9HBB8 845 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 NPDC1Q9NQX5 325 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 ZNF302Q9NR11 478 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 TPCN1Q9ULQ1 816 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 KCNJ14Q9UNX9 436 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 GINS2Q9Y248 185 aa11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-206ENST00000566779 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 POTEB3A0JP26 581 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 LCHNA4D1U4 455 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 M0QZ92 97 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 MAFGO15525 162 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 ARHGEF15O94989 841 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 CXCL10P02778 98 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 HOXC8P31273 242 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 EVCP57679 992 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 PDXDC2PQ6P474 469 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 POTEBQ6S5H4 581 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 SPRED2Q7Z698 418 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 CCDC60Q8IWA6 550 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 USP38Q8NB14 1042 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 TBCKQ8TEA7 893 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 OSBPL7Q9BZF2 842 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 PCDHA4Q9UN74 947 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 CDY2AQ9Y6F7 541 aa11.46□□□□□ -0.57
GTF3C1-206ENST00000566779 ARID2Q68CP9 1835 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 IGLV3-22A0A075B6J6 115 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 MAP3K7O43318 606 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 GAS7O60861 476 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 LARGE1O95461 756 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 TDP2O95551 362 aa11.45□□□□□ -0.58
GTF3C1-206ENST00000566779 CYP3A4P08684 503 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms