RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 LRRIQ4A6NIV6 560 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 ASNSP08243 561 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 RXRBP28702 533 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 ECE1P42892 770 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 LIG4P49917 911 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 GLIS3Q8NEA6 775 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 RSPH10B2B2RC85 870 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 RNF225M0QZC1 329 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 MED24O75448 989 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 RSPH10BP0C881 870 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 PRELPP51888 382 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 PADI6Q6TGC4 694 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 RUFY4Q6ZNE9 571 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 COL23A1Q86Y22 540 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 GLYCTKQ8IVS8 523 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 COG1Q8WTW3 980 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 ERGIC2Q96RQ1 377 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 FBXO28Q9NVF7 368 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 VIMP08670 466 aaKnown RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 APBA1Q02410 837 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ZNF746Q6NUN9 644 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ACER1Q8TDN7 264 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ACCSQ96QU6 501 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ANKFY1Q9P2R3 1169 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDH1-210ENST00000566612 SHMT1P34896 483 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 MXI1P50539 228 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 CEP55Q53EZ4 464 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 CENPPQ6IPU0 288 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 CCDC121Q6ZUS5 278 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 LDHDQ86WU2 507 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 DEPTORQ8TB45 409 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ANKS1AQ92625 1134 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 GLG1Q92896 1179 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 DNAJC7Q99615 494 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 LXNQ9BS40 222 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 SEPT9Q9UHD8 586 aaPredicted RBP12.6□□□□□ -0.39
CDH1-210ENST00000566612 PCDHAC2Q9Y5I4 1007 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 KIF4AO95239 1232 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 CD19P15391 556 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 CYP11B2P19099 503 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 FAM160B2Q86V87 743 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 DNAAF5Q86Y56 855 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 CYP2W1Q8TAV3 490 aa12.6□□□□□ -0.39
CDH1-210ENST00000566612 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
CDH1-210ENST00000566612 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDH1-210ENST00000566612 TM4SF1P30408 202 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 HERVK_113P62684 666 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 DRAP1Q14919 205 aaPredicted RBP12.59□□□□□ -0.39
CDH1-210ENST00000566612 RMDN3Q96TC7 470 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 RAB17Q9H0T7 212 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 KMT5AQ9NQR1 393 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 MKRN1Q9UHC7 482 aaKnown RBP12.59□□□□□ -0.39
CDH1-210ENST00000566612 ATP8A1Q9Y2Q0 1164 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 SLC16A4O15374 487 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 FGGP02679 453 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 PLTPP55058 493 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 EEPD1Q7L9B9 569 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 SPATA20Q8TB22 786 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 DDX47Q9H0S4 455 aaKnown RBP12.59□□□□□ -0.39
CDH1-210ENST00000566612 PSMD14O00487 310 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 FGRP09769 529 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 PSMC6P62333 389 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
CDH1-210ENST00000566612 ZNF211Q13398 564 aaPredicted RBP12.59□□□□□ -0.39
CDH1-210ENST00000566612 TRPC3Q13507 836 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 MTMR1Q13613 665 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 CCDC77Q9BR77 488 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
CDH1-210ENST00000566612 LRRC10BA6NIK2 292 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 KRT19P08727 400 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 UCHL3P15374 230 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 DESP17661 470 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 PDE6CP51160 858 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 POLGP54098 1239 aaPredicted RBP12.58□□□□□ -0.4
CDH1-210ENST00000566612 DCUN1D2Q6PH85 259 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 RNF10Q8N5U6 811 aaKnown RBP12.58□□□□□ -0.4
CDH1-210ENST00000566612 MED15Q96RN5 788 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 ARHGAP20Q9P2F6 1191 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 RNF14Q9UBS8 474 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms