RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 NPAS4Q8IUM7 802 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 SETD4Q9NVD3 440 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 NOP56O00567 594 aaKnown RBP12.96□□□□□ -0.33
CAPN3-215ENST00000565559 LGALS2P05162 132 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 NR3C2P08235 984 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 ARHGAP4P98171 946 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 TPRNQ4KMQ1 711 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 SPOUT1Q5T280 376 aaKnown RBP12.96□□□□□ -0.33
CAPN3-215ENST00000565559 KBTBD3Q8NAB2 608 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
CAPN3-215ENST00000565559 SMOC2Q9H3U7 446 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 KIAA1468Q9P260 1216 aa12.96□□□□□ -0.33
CAPN3-215ENST00000565559 MYH7P12883 1935 aa12.96□□□□□ -0.34
CAPN3-215ENST00000565559 M0R2C6 588 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 CHRNA1P02708 482 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 ASGR2P07307 311 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
CAPN3-215ENST00000565559 PDHBP11177 359 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 NOVP48745 357 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 PRSS12P56730 875 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 ITIH3Q06033 890 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 LPIN1Q14693 890 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 KIAA0319Q5VV43 1072 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 LLGL2Q6P1M3 1020 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 TAF2Q6P1X5 1199 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 SYCE2Q6PIF2 218 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 RASGRP4Q8TDF6 673 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 TMEM47Q9BQJ4 181 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
CAPN3-215ENST00000565559 ZNF215Q9UL58 517 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-215ENST00000565559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
CAPN3-215ENST00000565559 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 PI15O43692 258 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 TGFB3P10600 412 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 UBA1P22314 1058 aaKnown RBP12.94□□□□□ -0.34
CAPN3-215ENST00000565559 RFX1P22670 979 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 PTGDRQ13258 359 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 TSHZ1Q6ZSZ6 1077 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 THNSL1Q8IYQ7 743 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 CASP10Q92851 521 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 POMKQ9H5K3 350 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 FBXL21Q9UKT6 434 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 LRFN2Q9ULH4 789 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 R4GN57 208 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 PKD1L2Q7Z442 2459 aa12.94□□□□□ -0.34
CAPN3-215ENST00000565559 BHMG1C9JSJ3 638 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-215ENST00000565559 FGF18O76093 207 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-215ENST00000565559 MTHFRP42898 656 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 ERVFC1P60507 584 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
CAPN3-215ENST00000565559 PLPP4Q5VZY2 271 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 LMBR1Q8WVP7 490 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 ENTPD7Q9NQZ7 604 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 LIMD1Q9UGP4 676 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
CAPN3-215ENST00000565559 MRPL11Q9Y3B7 192 aaKnown RBP12.93□□□□□ -0.34
CAPN3-215ENST00000565559 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
CAPN3-215ENST00000565559 NRCAMQ92823 1304 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 FSCN2O14926 492 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 SCG2P13521 617 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 MAP1BP46821 2468 aaKnown RBP12.92□□□□□ -0.34
CAPN3-215ENST00000565559 KCNC3Q14003 757 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 COL9A2Q14055 689 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-215ENST00000565559 CDC37Q16543 378 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-215ENST00000565559 FBXO47Q5MNV8 452 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 TCF25Q9BQ70 676 aa12.92□□□□□ -0.34
CAPN3-215ENST00000565559 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-215ENST00000565559 ORC4O43929 436 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 CFBP00751 764 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 RPLP2P05387 115 aaKnown RBP12.91□□□□□ -0.34
CAPN3-215ENST00000565559 NPR3P17342 541 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 CD52P31358 61 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 MGAT3Q09327 533 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 SIX5Q8N196 739 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 DCLK2Q8N568 766 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
CAPN3-215ENST00000565559 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
CAPN3-215ENST00000565559 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms