RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 AASDHPPTQ9NRN7 309 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 BTBD7Q9P203 1132 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 MSRAQ9UJ68 235 aa6.49□□□□□ -1.37
CDH1-207ENST00000564745 PRAMEF22A3QJZ6 481 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 ZNF503-AS2A6NEH8 195 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 GOLGA8AA7E2F4 631 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 GOLGA8BA8MQT2 603 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 ASGR2P07307 311 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 CLEC2LP0C7M8 214 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 CD40P25942 277 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 MC3RP41968 323 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 GPR3P46089 330 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 FNTBP49356 437 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 DBPQ10586 325 aaPredicted RBP6.48□□□□□ -1.37
CDH1-207ENST00000564745 EPHA7Q15375 998 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 NFE2Q16621 373 aaPredicted RBP6.48□□□□□ -1.37
CDH1-207ENST00000564745 CR1LQ2VPA4 569 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 CD276Q5ZPR3 534 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 LIPIQ6XZB0 460 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 ZNF605Q86T29 641 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 ZBTB46Q86UZ6 589 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 AMIGO3Q86WK7 504 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 CILP2Q8IUL8 1156 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 HIPK4Q8NE63 616 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 C1orf162Q8NEQ5 155 aaPredicted RBP6.48□□□□□ -1.37
CDH1-207ENST00000564745 LMBR1Q8WVP7 490 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 CHMP4CQ96CF2 233 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
CDH1-207ENST00000564745 RTFDC1Q9BY42 306 aaPredicted RBP6.48□□□□□ -1.37
CDH1-207ENST00000564745 POFUT1Q9H488 388 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 SLC39A2Q9NP94 309 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 UCKL1Q9NWZ5 548 aa6.48□□□□□ -1.37
CDH1-207ENST00000564745 GOLGA6L22H0YM25 854 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA12O60330 932 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 MPIG6BO95866 241 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 FBLN1P23142 703 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 AOAHP28039 575 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 NCKAP1LP55160 1127 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 HERVK_113P62684 666 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PGM2L1Q6PCE3 622 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 ETV3LQ6ZN32 361 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 FRMD7Q6ZUT3 714 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 IRF2BP1Q8IU81 584 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 ANO3Q9BYT9 981 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PRDM12Q9H4Q4 367 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 ZIM2Q9NZV7 527 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 TCEAL9Q9UHQ7 104 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA9Q9Y5G4 932 aaKnown RBP6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA8Q9Y5G5 932 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA7Q9Y5G6 932 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA6Q9Y5G7 932 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA3Q9Y5H0 932 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 PCDHGA2Q9Y5H1 932 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 CARMIL2Q6F5E8 1435 aa6.47□□□□□ -1.37
CDH1-207ENST00000564745 SCGB1D2O95969 90 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 C8BP07358 591 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 FAPQ12884 760 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 ODF1Q14990 250 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 PPP2R5AQ15172 486 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 CT83Q5H943 113 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 ZBTB41Q5SVQ8 909 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 PHF19Q5T6S3 580 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 LRSAM1Q6UWE0 723 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 TMC5Q6UXY8 1006 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 CD300LDQ6UXZ3 194 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 FAM168AQ92567 244 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 FAXDC2Q96IV6 333 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 MYL10Q9BUA6 226 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
CDH1-207ENST00000564745 WASHC2AQ641Q2 1341 aa6.46□□□□□ -1.38
CDH1-207ENST00000564745 MYOCOSA0A1B0GUC4 107 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 UBA6A0AVT1 1052 aaPredicted RBP6.45□□□□□ -1.38
CDH1-207ENST00000564745 NFIBO00712 420 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 TSPAN6O43657 245 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 APOL3O95236 402 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 RGS3P49796 1198 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 PFKPQ01813 784 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 PIN1Q13526 163 aaPredicted RBP6.45□□□□□ -1.38
CDH1-207ENST00000564745 MOGSQ13724 837 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 MYBPC3Q14896 1274 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 MPZL3Q6UWV2 235 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 UNQ6494/PRO21346Q6UXR6 183 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 PRR23BQ6ZRT6 265 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 STK32CQ86UX6 486 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 CXorf67Q86X51 503 aaPredicted RBP6.45□□□□□ -1.38
CDH1-207ENST00000564745 ZZZ3Q8IYH5 903 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 DIRC2Q96SL1 478 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 AMNQ9BXJ7 453 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 CCM2LQ9NUG4 571 aaPredicted RBP6.45□□□□□ -1.38
CDH1-207ENST00000564745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDH1-207ENST00000564745 PPP2R3BQ9Y5P8 575 aa6.45□□□□□ -1.38
CDH1-207ENST00000564745 PRSS38A1L453 326 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 PRLP01236 227 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 ATF2P15336 505 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 ITGB5P18084 799 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms