RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 MYLIPQ8WY64 445 aa34.76■■■■□ 3.16
CMTM4-204ENST00000563952 OSBPL7Q9BZF2 842 aa34.76■■■■□ 3.16
CMTM4-204ENST00000563952 SLC28A3Q9HAS3 691 aa34.76■■■■□ 3.16
CMTM4-204ENST00000563952 BRMS1Q9HCU9 246 aa34.76■■■■□ 3.16
CMTM4-204ENST00000563952 GABBR1Q9UBS5 961 aa34.76■■■■□ 3.16
CMTM4-204ENST00000563952 MYH9P35579 1960 aaKnown RBP34.75■■■■□ 3.15
CMTM4-204ENST00000563952 HBP1O60381 514 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 KRT2P35908 639 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 TRMT1LQ7Z2T5 733 aaKnown RBP34.75■■■■□ 3.15
CMTM4-204ENST00000563952 NEK8Q86SG6 692 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 RPAINQ86UA6 219 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 HERC6Q8IVU3 1022 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 MBOAT7Q96N66 472 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 PTPRSQ13332 1948 aa34.75■■■■□ 3.15
CMTM4-204ENST00000563952 CHRNA1P02708 482 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 DEFB103AP81534 67 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 TRIM29Q14134 588 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 PLEKHG4Q58EX7 1191 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 SEPT8Q92599 483 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 UNC45AQ9H3U1 944 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 UPF2Q9HAU5 1272 aaKnown RBP34.74■■■■□ 3.15
CMTM4-204ENST00000563952 DISC1Q9NRI5 854 aa34.74■■■■□ 3.15
CMTM4-204ENST00000563952 MAFBQ9Y5Q3 323 aaPredicted RBP34.74■■■■□ 3.15
CMTM4-204ENST00000563952 EFCAB14O75071 495 aa34.73■■■■□ 3.15
CMTM4-204ENST00000563952 ATP4AP20648 1035 aa34.73■■■■□ 3.15
CMTM4-204ENST00000563952 NR5A1Q13285 461 aa34.73■■■■□ 3.15
CMTM4-204ENST00000563952 TMCO2Q7Z6W1 182 aaPredicted RBP34.73■■■■□ 3.15
CMTM4-204ENST00000563952 ZSCAN31Q96LW9 406 aaPredicted RBP34.73■■■■□ 3.15
CMTM4-204ENST00000563952 PCDHA2Q9Y5H9 948 aa34.73■■■■□ 3.15
CMTM4-204ENST00000563952 SLC37A4O43826 429 aa34.72■■■■□ 3.15
CMTM4-204ENST00000563952 EARS2Q5JPH6 523 aaKnown RBP34.72■■■■□ 3.15
CMTM4-204ENST00000563952 PPP2R2DQ66LE6 453 aa34.72■■■■□ 3.15
CMTM4-204ENST00000563952 MTHFD1LQ6UB35 978 aa34.72■■■■□ 3.15
CMTM4-204ENST00000563952 SIP14410 1827 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 FAM205CA6NFA0 338 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 KIF28PB7ZC32 967 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 PSMD10O75832 226 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 JAK3P52333 1124 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 MGAT3Q09327 533 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 ETNPPLQ8TBG4 499 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 CDY2AQ9Y6F7 541 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 WDR81Q562E7 1941 aa34.71■■■■□ 3.15
CMTM4-204ENST00000563952 CCNT1O60563 726 aaKnown RBP34.7■■■■□ 3.15
CMTM4-204ENST00000563952 MMP1P03956 469 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 CA3P07451 260 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 GHRP10912 638 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 KLRC1P26715 233 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 SFNP31947 248 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 MRPS6P82932 125 aaKnown RBP34.7■■■■□ 3.15
CMTM4-204ENST00000563952 ZNF484Q5JVG2 852 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 KRT40Q6A162 431 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 BBXQ8WY36 941 aaPredicted RBP34.7■■■■□ 3.15
CMTM4-204ENST00000563952 ZBED2Q9BTP6 218 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 IGSF9BQ9UPX0 1349 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 COL1A2P08123 1366 aa34.7■■■■□ 3.15
CMTM4-204ENST00000563952 TLL1O43897 1013 aa34.69■■■■□ 3.14
CMTM4-204ENST00000563952 RPLP2P05387 115 aaKnown RBP34.69■■■■□ 3.14
CMTM4-204ENST00000563952 FOSL2P15408 326 aa34.69■■■■□ 3.14
CMTM4-204ENST00000563952 GCFC2P16383 781 aaKnown RBP34.69■■■■□ 3.14
CMTM4-204ENST00000563952 TMEM62Q0P6H9 643 aa34.69■■■■□ 3.14
CMTM4-204ENST00000563952 RABEP1Q15276 862 aa34.69■■■■□ 3.14
CMTM4-204ENST00000563952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP34.69■■■■□ 3.14
CMTM4-204ENST00000563952 MIER3Q7Z3K6 550 aa34.69■■■■□ 3.14
CMTM4-204ENST00000563952 IFIH1Q9BYX4 1025 aaKnown RBP34.69■■■■□ 3.14
CMTM4-204ENST00000563952 SH2B1Q9NRF2 756 aaPredicted RBP34.69■■■■□ 3.14
CMTM4-204ENST00000563952 MICAL3Q7RTP6 2002 aa34.69■■■■□ 3.14
CMTM4-204ENST00000563952 IER5Q5VY09 327 aa34.68■■■■□ 3.14
CMTM4-204ENST00000563952 PPP4R3AQ6IN85 833 aa34.68■■■■□ 3.14
CMTM4-204ENST00000563952 DIS3L2Q8IYB7 885 aaKnown RBP34.68■■■■□ 3.14
CMTM4-204ENST00000563952 TNFRSF25Q93038 417 aa34.68■■■■□ 3.14
CMTM4-204ENST00000563952 NAP1L4Q99733 375 aaKnown RBP34.68■■■■□ 3.14
CMTM4-204ENST00000563952 LLPHQ9BRT6 129 aaKnown RBP34.68■■■■□ 3.14
CMTM4-204ENST00000563952 PRDM12Q9H4Q4 367 aa34.68■■■■□ 3.14
CMTM4-204ENST00000563952 SMIM35A0A1B0GVV1 85 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 ZBTB42B2RXF5 422 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 BTBD18B2RXH4 712 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 M0QZ92 97 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 LPIN1Q14693 890 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 FAM117BQ6P1L5 589 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 FAM167AQ96KS9 214 aa34.67■■■■□ 3.14
CMTM4-204ENST00000563952 AMHP03971 560 aa34.66■■■■□ 3.14
CMTM4-204ENST00000563952 GUCY1B3Q02153 619 aa34.66■■■■□ 3.14
CMTM4-204ENST00000563952 UGCGQ16739 394 aa34.66■■■■□ 3.14
CMTM4-204ENST00000563952 APBB2Q92870 758 aa34.66■■■■□ 3.14
CMTM4-204ENST00000563952 TRPV2Q9Y5S1 764 aa34.66■■■■□ 3.14
CMTM4-204ENST00000563952 ZNF862O60290 1169 aa34.65■■■■□ 3.14
CMTM4-204ENST00000563952 PRKCEQ02156 737 aa34.65■■■■□ 3.14
CMTM4-204ENST00000563952 FBXO47Q5MNV8 452 aa34.65■■■■□ 3.14
CMTM4-204ENST00000563952 MYOCDQ8IZQ8 938 aa34.65■■■■□ 3.14
CMTM4-204ENST00000563952 RDM1Q8NG50 284 aa34.65■■■■□ 3.14
CMTM4-204ENST00000563952 MARCH6O60337 910 aa34.64■■■■□ 3.14
CMTM4-204ENST00000563952 OATP04181 439 aa34.64■■■■□ 3.14
CMTM4-204ENST00000563952 MKRN4PQ13434 485 aaPredicted RBP34.64■■■■□ 3.14
CMTM4-204ENST00000563952 FAM20AQ96MK3 541 aa34.64■■■■□ 3.14
CMTM4-204ENST00000563952 KCNMB3Q9NPA1 279 aa34.64■■■■□ 3.14
CMTM4-204ENST00000563952 NRBP2Q9NSY0 501 aa34.64■■■■□ 3.14
CMTM4-204ENST00000563952 CEP131Q9UPN4 1083 aa34.64■■■■□ 3.14
CMTM4-204ENST00000563952 ST18O60284 1047 aa34.63■■■■□ 3.13
CMTM4-204ENST00000563952 GJB5O95377 273 aa34.63■■■■□ 3.13
CMTM4-204ENST00000563952 C22orf31O95567 290 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms