RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 MICAL3Q7RTP6 2002 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 WDR64B1ANS9 1081 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 CHMP2AO43633 222 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 DNAJB2P25686 324 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 GUCY1B3Q02153 619 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 ZNF697Q5TEC3 545 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 PPP4R3AQ6IN85 833 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 CNKSR3Q6P9H4 555 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 RPAINQ86UA6 219 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 DNAJB3Q8WWF6 145 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 TNPO1Q92973 898 aaKnown RBP31.97■■■□□ 2.71
NME3-203ENST00000563367 GABBR1Q9UBS5 961 aa31.97■■■□□ 2.71
NME3-203ENST00000563367 ST18O60284 1047 aa31.96■■■□□ 2.71
NME3-203ENST00000563367 HBP1O60381 514 aa31.96■■■□□ 2.71
NME3-203ENST00000563367 CCNT1O60563 726 aaKnown RBP31.96■■■□□ 2.71
NME3-203ENST00000563367 FAM26DQ5JW98 314 aa31.96■■■□□ 2.71
NME3-203ENST00000563367 B3GNT9Q6UX72 402 aa31.96■■■□□ 2.71
NME3-203ENST00000563367 SEMA6BQ9H3T3 888 aa31.96■■■□□ 2.71
NME3-203ENST00000563367 BAIAP3O94812 1187 aa31.95■■■□□ 2.71
NME3-203ENST00000563367 CHRNA1P02708 482 aa31.95■■■□□ 2.71
NME3-203ENST00000563367 GCFC2P16383 781 aaKnown RBP31.95■■■□□ 2.71
NME3-203ENST00000563367 ATP2A2P16615 1042 aaKnown RBP31.95■■■□□ 2.71
NME3-203ENST00000563367 RABGGTBP53611 331 aa31.95■■■□□ 2.71
NME3-203ENST00000563367 IGSF9BQ9UPX0 1349 aa31.95■■■□□ 2.7
NME3-203ENST00000563367 ZBTB42B2RXF5 422 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 CKAP2LQ8IYA6 745 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 TIFAQ96CG3 184 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 C8orf76Q96K31 380 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 KCNMB3Q9NPA1 279 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 PCDHA2Q9Y5H9 948 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 MYO9BQ13459 2157 aa31.94■■■□□ 2.7
NME3-203ENST00000563367 SFNP31947 248 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 JAK3P52333 1124 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 HMGN5P82970 282 aaKnown RBP31.93■■■□□ 2.7
NME3-203ENST00000563367 MGAT3Q09327 533 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 UGCGQ16739 394 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 MTHFD1LQ6UB35 978 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 TRMT1LQ7Z2T5 733 aaKnown RBP31.93■■■□□ 2.7
NME3-203ENST00000563367 GUCD1Q96NT3 240 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 BACH2Q9BYV9 841 aa31.93■■■□□ 2.7
NME3-203ENST00000563367 FAM49AQ9H0Q0 323 aaPredicted RBP31.93■■■□□ 2.7
NME3-203ENST00000563367 ZNF862O60290 1169 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 KLRC1P26715 233 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 WDR5P61964 334 aaKnown RBP31.92■■■□□ 2.7
NME3-203ENST00000563367 PLEKHG4Q58EX7 1191 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 MIER3Q7Z3K6 550 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 DBF4BQ8NFT6 615 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 BBXQ8WY36 941 aaPredicted RBP31.92■■■□□ 2.7
NME3-203ENST00000563367 HAS1Q92839 578 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 NAP1L4Q99733 375 aaKnown RBP31.92■■■□□ 2.7
NME3-203ENST00000563367 YBX2Q9Y2T7 364 aaKnown RBP31.92■■■□□ 2.7
NME3-203ENST00000563367 COL1A2P08123 1366 aa31.92■■■□□ 2.7
NME3-203ENST00000563367 WNT7AO00755 349 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 ZNF484Q5JVG2 852 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 RSPH3Q86UC2 560 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 POTEDQ86YR6 584 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 TMX3Q96JJ7 454 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 FAM20AQ96MK3 541 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 SLC9A7Q96T83 725 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 CHD9Q3L8U1 2897 aa31.91■■■□□ 2.7
NME3-203ENST00000563367 TMEM265A0A087WTH1 108 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 ABHD14A-ACY1A0A1B0GW23 586 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 MYOGP15173 224 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 IKBKEQ14164 716 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 RAB30Q15771 203 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 IL27Q8NEV9 243 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 RDM1Q8NG50 284 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 MSRAQ9UJ68 235 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 VAV3Q9UKW4 847 aa31.9■■■□□ 2.7
NME3-203ENST00000563367 DEFB103AP81534 67 aa31.89■■■□□ 2.7
NME3-203ENST00000563367 FAM184AQ8NB25 1140 aa31.89■■■□□ 2.7
NME3-203ENST00000563367 FBXO18Q8NFZ0 1043 aa31.89■■■□□ 2.7
NME3-203ENST00000563367 PHOSPHO2Q8TCD6 241 aa31.89■■■□□ 2.7
NME3-203ENST00000563367 NKX2-4Q9H2Z4 354 aa31.89■■■□□ 2.7
NME3-203ENST00000563367 CDY2AQ9Y6F7 541 aa31.89■■■□□ 2.7
NME3-203ENST00000563367 CDH23Q9H251 3354 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 SMIM35A0A1B0GVV1 85 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 EML1O00423 815 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 TBX3O15119 743 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 KCNJ6P48051 423 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 MRPS6P82932 125 aaKnown RBP31.88■■■□□ 2.69
NME3-203ENST00000563367 TMEM62Q0P6H9 643 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 MKRN4PQ13434 485 aaPredicted RBP31.88■■■□□ 2.69
NME3-203ENST00000563367 SAFBQ15424 915 aaKnown RBP eCLIP31.88■■■□□ 2.69
NME3-203ENST00000563367 TMCO2Q7Z6W1 182 aaPredicted RBP31.88■■■□□ 2.69
NME3-203ENST00000563367 HERC6Q8IVU3 1022 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 ZNF576Q9H609 170 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 PCDHA11Q9Y5I1 949 aa31.88■■■□□ 2.69
NME3-203ENST00000563367 OATP04181 439 aa31.87■■■□□ 2.69
NME3-203ENST00000563367 PRKCEQ02156 737 aa31.87■■■□□ 2.69
NME3-203ENST00000563367 PPP2R5CQ13362 524 aa31.87■■■□□ 2.69
NME3-203ENST00000563367 SEPT8Q92599 483 aa31.87■■■□□ 2.69
NME3-203ENST00000563367 FAM167AQ96KS9 214 aa31.87■■■□□ 2.69
NME3-203ENST00000563367 COL6A3P12111 3177 aa31.86■■■□□ 2.69
NME3-203ENST00000563367 C22orf31O95567 290 aa31.86■■■□□ 2.69
NME3-203ENST00000563367 GHRP10912 638 aa31.86■■■□□ 2.69
NME3-203ENST00000563367 LPIN1Q14693 890 aa31.86■■■□□ 2.69
NME3-203ENST00000563367 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.86■■■□□ 2.69
NME3-203ENST00000563367 CDX2Q99626 313 aaPredicted RBP31.86■■■□□ 2.69
NME3-203ENST00000563367 EFCAB14O75071 495 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms