RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 ZBTB42B2RXF5 422 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 DKC1O60832 514 aaKnown RBP eCLIP17.1■□□□□ 0.33
EDC3-206ENST00000563009 SLITRK3O94933 977 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 OATP04181 439 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
EDC3-206ENST00000563009 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
EDC3-206ENST00000563009 MARCH8Q5T0T0 291 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 C4orf19Q8IY42 314 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 CKAP2LQ8IYA6 745 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
EDC3-206ENST00000563009 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 ZNF396Q96N95 335 aaPredicted RBP17.1■□□□□ 0.33
EDC3-206ENST00000563009 LXNQ9BS40 222 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 RAB34Q9BZG1 259 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 WRAP73Q9P2S5 460 aaPredicted RBP17.1■□□□□ 0.33
EDC3-206ENST00000563009 COL1A2P08123 1366 aa17.1■□□□□ 0.33
EDC3-206ENST00000563009 TREHO43280 583 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 LYPLA2O95372 231 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 SPATA31C1P0DKV0 1188 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 XKR3Q5GH77 459 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 ATL3Q6DD88 541 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 POLR3CQ9BUI4 534 aaPredicted RBP17.09■□□□□ 0.33
EDC3-206ENST00000563009 NIFKQ9BYG3 293 aaKnown RBP17.09■□□□□ 0.33
EDC3-206ENST00000563009 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 TUFT1Q9NNX1 390 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 NRBP2Q9NSY0 501 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
EDC3-206ENST00000563009 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
EDC3-206ENST00000563009 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.33
EDC3-206ENST00000563009 LTBP2Q14767 1821 aa17.08■□□□□ 0.33
EDC3-206ENST00000563009 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 CYP2C9P11712 490 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 RPA1P27694 616 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 NUCB2P80303 420 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 CYP4A11Q02928 519 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 RBL2Q08999 1139 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 PTK7Q13308 1070 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 CTTNQ14247 550 aaKnown RBP17.08■□□□□ 0.32
EDC3-206ENST00000563009 SLC39A14Q15043 492 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 TARBP2Q15633 366 aaKnown RBP17.08■□□□□ 0.32
EDC3-206ENST00000563009 ANO5Q75V66 913 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 DHX38Q92620 1227 aaKnown RBP17.08■□□□□ 0.32
EDC3-206ENST00000563009 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
EDC3-206ENST00000563009 PRDM5Q9NQX1 630 aaPredicted RBP17.08■□□□□ 0.32
EDC3-206ENST00000563009 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
EDC3-206ENST00000563009 TUBE1Q9UJT0 475 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 NOD1Q9Y239 953 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 STK24Q9Y6E0 443 aa17.08■□□□□ 0.32
EDC3-206ENST00000563009 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 MED24O75448 989 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 MUTP22033 750 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 ITGB8P26012 769 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 IGBP1P78318 339 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
EDC3-206ENST00000563009 TRIM71Q2Q1W2 868 aaKnown RBP17.07■□□□□ 0.32
EDC3-206ENST00000563009 HAUS3Q68CZ6 603 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 TPH2Q8IWU9 490 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 LINC00301Q8NCQ3 95 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 TRAPPC12Q8WVT3 735 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 WNT8BQ93098 351 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 AK8Q96MA6 479 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 CEP89Q96ST8 783 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 HIPK3Q9H422 1215 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
EDC3-206ENST00000563009 PRKAG2Q9UGJ0 569 aa17.07■□□□□ 0.32
EDC3-206ENST00000563009 FBXO2Q9UK22 296 aaPredicted RBP17.07■□□□□ 0.32
EDC3-206ENST00000563009 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
EDC3-206ENST00000563009 H0YGN5 161 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 YEATS4O95619 227 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 TIMP1P01033 207 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 SYN1P17600 705 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 YWHABP31946 246 aaKnown RBP17.06■□□□□ 0.32
EDC3-206ENST00000563009 TAF2Q6P1X5 1199 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 MTHFD1LQ6UB35 978 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 TRMT1LQ7Z2T5 733 aaKnown RBP17.06■□□□□ 0.32
EDC3-206ENST00000563009 RPAINQ86UA6 219 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 MMTAG2Q9BU76 263 aaKnown RBP17.06■□□□□ 0.32
EDC3-206ENST00000563009 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
EDC3-206ENST00000563009 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
EDC3-206ENST00000563009 PCDHA2Q9Y5H9 948 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
EDC3-206ENST00000563009 SRPRBQ9Y5M8 271 aaKnown RBP17.06■□□□□ 0.32
EDC3-206ENST00000563009 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 PP2D1A8MPX8 630 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 CAND2O75155 1236 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 C22orf31O95567 290 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.32
EDC3-206ENST00000563009 RAG1P15918 1043 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 KLRC1P26715 233 aa17.05■□□□□ 0.32
EDC3-206ENST00000563009 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
EDC3-206ENST00000563009 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
EDC3-206ENST00000563009 DNM1Q05193 864 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms