RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 NT5C1AQ9BXI3 368 aa9.05□□□□□ -0.96
KARS-203ENST00000562875 FOXP1Q9H334 677 aaPredicted RBP9.05□□□□□ -0.96
KARS-203ENST00000562875 GREM2Q9H772 168 aa9.05□□□□□ -0.96
KARS-203ENST00000562875 GNL3LQ9NVN8 582 aaKnown RBP9.05□□□□□ -0.96
KARS-203ENST00000562875 TUBE1Q9UJT0 475 aa9.05□□□□□ -0.96
KARS-203ENST00000562875 INPP5FQ9Y2H2 1132 aa9.05□□□□□ -0.96
KARS-203ENST00000562875 MYH8P13535 1937 aa9.05□□□□□ -0.96
KARS-203ENST00000562875 BIN1O00499 593 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 KIF20AO95235 890 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 CALM1P0DP23 149 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 CALM2P0DP24 149 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 CALM3P0DP25 149 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 IFNAR1P17181 557 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 U2AF2P26368 475 aaKnown RBP eCLIP9.04□□□□□ -0.96
KARS-203ENST00000562875 MARCKSP29966 332 aaPredicted RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 IL6STP40189 918 aaPredicted RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 ERVK-24P63145 666 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 MPP2Q14168 576 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 CCDC152Q4G0S7 254 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 PARP10Q53GL7 1025 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 OTUD7BQ6GQQ9 843 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 TMED8Q6PL24 325 aaPredicted RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 KRBA2Q6ZNG9 492 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 NOSTRINQ8IVI9 506 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 IFNL3Q8IZI9 196 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 KRT222Q8N1A0 295 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 MLKLQ8NB16 471 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 SPATA5Q8NB90 893 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 FAM46AQ96IP4 442 aaKnown RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 FANCD2OSQ96PS1 177 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 ATXN3LQ9H3M9 355 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 RBM28Q9NW13 759 aaKnown RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 TRMT1Q9NXH9 659 aaKnown RBP9.04□□□□□ -0.96
KARS-203ENST00000562875 KCNH3Q9ULD8 1083 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 HPSEQ9Y251 543 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 ACTL7BQ9Y614 415 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 SNCAIPQ9Y6H5 919 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 PNPLA7Q6ZV29 1317 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 SCN7AQ01118 1682 aa9.04□□□□□ -0.96
KARS-203ENST00000562875 BAZ2AQ9UIF9 1905 aaKnown RBP9.03□□□□□ -0.96
KARS-203ENST00000562875 DUOX1Q9NRD9 1551 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 A0A0G2JLW4 131 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 MBD4O95243 580 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 MMP1P03956 469 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
KARS-203ENST00000562875 GPTP24298 496 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 ASPAP45381 313 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 CRKP46108 304 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 BMS1Q14692 1282 aaKnown RBP9.03□□□□□ -0.96
KARS-203ENST00000562875 FILIP1LQ4L180 1135 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 AXDND1Q5T1B0 1012 aaPredicted RBP9.03□□□□□ -0.96
KARS-203ENST00000562875 CYB5R4Q7L1T6 521 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 TBC1D10CQ8IV04 446 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 MAGEB6Q8N7X4 407 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 ANKRD20A12PQ8NF67 263 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 STAG1Q8WVM7 1258 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 ESR2Q92731 530 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 PPP1R13BQ96KQ4 1090 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 STRBPQ96SI9 672 aaKnown RBP9.03□□□□□ -0.96
KARS-203ENST00000562875 LY9Q9HBG7 655 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 PICK1Q9NRD5 415 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 DISC1Q9NRI5 854 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 HIF3AQ9Y2N7 669 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 SLC4A4Q9Y6R1 1079 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 ZNF831Q5JPB2 1677 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 NEDD4P46934 1319 aa9.03□□□□□ -0.96
KARS-203ENST00000562875 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.96
KARS-203ENST00000562875 PRAMEF27A3QJZ7 478 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 ITGB2P05107 769 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 USP11P51784 963 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 POSTNQ15063 836 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 SEZ6Q53EL9 994 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 PPM1JQ5JR12 505 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 RRP12Q5JTH9 1297 aaKnown RBP9.02□□□□□ -0.97
KARS-203ENST00000562875 ZNF771Q7L3S4 317 aaPredicted RBP9.02□□□□□ -0.97
KARS-203ENST00000562875 REC114Q7Z4M0 266 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 NBPF11Q86T75 865 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 RAB11FIP4Q86YS3 637 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 VGLL2Q8N8G2 317 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 IGDCC4Q8TDY8 1250 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 NKD1Q969G9 470 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
KARS-203ENST00000562875 GPRASP2Q96D09 838 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 UTP14AQ9BVJ6 771 aaKnown RBP9.02□□□□□ -0.97
KARS-203ENST00000562875 PIH1D3Q9NQM4 214 aaKnown RBP9.02□□□□□ -0.97
KARS-203ENST00000562875 FAM105AQ9NUU6 356 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 LRP2BPQ9P2M1 347 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 BCL9O00512 1426 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 UBN2Q6ZU65 1347 aa9.02□□□□□ -0.97
KARS-203ENST00000562875 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
KARS-203ENST00000562875 GFRA2O00451 464 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms