RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CXCL10P02778 98 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 SMIM10L2AP0DMW4 78 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 SMIM10L2BP0DMW5 78 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 CKBP12277 381 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 INF2Q27J81 1249 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 NEK8Q86SG6 692 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 MBOAT7Q96N66 472 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 ERAP1Q9NZ08 941 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 COG5Q9UP83 839 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 DDX39AO00148 427 aaKnown RBP18.74■□□□□ 0.59
CDT1-202ENST00000562747 CD2BP2O95400 341 aaKnown RBP18.74■□□□□ 0.59
CDT1-202ENST00000562747 HOXC8P31273 242 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 PLA2G5P39877 138 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 ZNF200P98182 395 aaPredicted RBP18.74■□□□□ 0.59
CDT1-202ENST00000562747 HIC1Q14526 733 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 MBTPS1Q14703 1052 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 TRIM71Q2Q1W2 868 aaKnown RBP18.74■□□□□ 0.59
CDT1-202ENST00000562747 ZNF746Q6NUN9 644 aaPredicted RBP18.74■□□□□ 0.59
CDT1-202ENST00000562747 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 PIK3AP1Q6ZUJ8 805 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 FAM184AQ8NB25 1140 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 GLG1Q92896 1179 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 KHSRPQ92945 711 aaKnown RBP eCLIP18.74■□□□□ 0.59
CDT1-202ENST00000562747 TNFRSF25Q93038 417 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 HLA-CQ95604 372 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 TMX3Q96JJ7 454 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 NAP1L4Q99733 375 aaKnown RBP18.74■□□□□ 0.59
CDT1-202ENST00000562747 EPHX3Q9H6B9 360 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 AZI2Q9H6S1 392 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 TCEAL9Q9UHQ7 104 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 MTUS1Q9ULD2 1270 aa18.74■□□□□ 0.59
CDT1-202ENST00000562747 BRWD1Q9NSI6 2320 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 C17orf102A2RUQ5 167 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 MSH4O15457 936 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 TDP2O95551 362 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 CCNE2O96020 404 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 GNAT1P11488 350 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 GCFC2P16383 781 aaKnown RBP18.73■□□□□ 0.59
CDT1-202ENST00000562747 KRT76Q01546 638 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 NR5A1Q13285 461 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 PTK7Q13308 1070 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 PPP4R3AQ6IN85 833 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 ABHD15Q6UXT9 468 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 PLPPR4Q7Z2D5 763 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 SMAP1Q8IYB5 467 aaPredicted RBP18.73■□□□□ 0.59
CDT1-202ENST00000562747 DIS3L2Q8IYB7 885 aaKnown RBP18.73■□□□□ 0.59
CDT1-202ENST00000562747 C8orf76Q96K31 380 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 PCYT2Q99447 389 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 RIT2Q99578 217 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 C1QTNF1Q9BXJ1 281 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 RNPEPQ9H4A4 650 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 NRCAMQ92823 1304 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
CDT1-202ENST00000562747 IGKV6D-21A0A0A0MT36 114 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 BTBD18B2RXH4 712 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 GJB5O95377 273 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 SLC26A2P50443 739 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 FOSBP53539 338 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 SAFBQ15424 915 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDT1-202ENST00000562747 LETM2Q2VYF4 491 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 ZNF618Q5T7W0 954 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 SLC5A5Q92911 643 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 TNPO1Q92973 898 aaKnown RBP18.72■□□□□ 0.59
CDT1-202ENST00000562747 ZBED2Q9BTP6 218 aa18.72■□□□□ 0.59
CDT1-202ENST00000562747 DDX25Q9UHL0 483 aaKnown RBP18.72■□□□□ 0.59
CDT1-202ENST00000562747 LINC01553A4QN01 128 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 GAS7O60861 476 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 STAT5BP51692 787 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 EARS2Q5JPH6 523 aaKnown RBP18.71■□□□□ 0.59
CDT1-202ENST00000562747 FAM160B1Q5W0V3 765 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 MIS18BP1Q6P0N0 1132 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 FAM117BQ6P1L5 589 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 SERINC5Q86VE9 423 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 ATP6V0A1Q93050 837 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 UIMC1Q96RL1 719 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 TEKT3Q9BXF9 490 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 SUGCTQ9HAC7 445 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
CDT1-202ENST00000562747 CCNT1O60563 726 aaKnown RBP18.7■□□□□ 0.58
CDT1-202ENST00000562747 PSMD10O75832 226 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 MARK3P27448 753 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 ADAM17P78536 824 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 MKRN4PQ13434 485 aaPredicted RBP18.7■□□□□ 0.58
CDT1-202ENST00000562747 LRCH2Q5VUJ6 765 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 FBXO18Q8NFZ0 1043 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 ETNPPLQ8TBG4 499 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 LRFN3Q9BTN0 628 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 CD320Q9NPF0 282 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 SETD4Q9NVD3 440 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 PCDHA10Q9Y5I2 948 aa18.7■□□□□ 0.58
CDT1-202ENST00000562747 ABHD14A-ACY1A0A1B0GW23 586 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 WDR64B1ANS9 1081 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 BACH1O14867 736 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 TREHO43280 583 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 SLC37A4O43826 429 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 PARNO95453 639 aaKnown RBP18.69■□□□□ 0.58
CDT1-202ENST00000562747 PSAPP07602 524 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 ERVK-21P61565 698 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 GUCY1B3Q02153 619 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms