RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 NPEPPSP55786 919 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 MAGOHP61326 146 aaKnown RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 RAPGEF1Q13905 1077 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 CLUL1Q15846 466 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 KRT71Q3SY84 523 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 TRIM59Q8IWR1 403 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 ZNF713Q8N859 430 aaPredicted RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 MAB21L3Q8N8X9 362 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 MAGOHBQ96A72 148 aaKnown RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 PNMA5Q96PV4 448 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 MTMR9Q96QG7 549 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 SUCLA2Q9P2R7 463 aaPredicted RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 CNOT8Q9UFF9 292 aaKnown RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 INTUQ9ULD6 942 aa20.35■□□□□ 0.85
BBS4-204ENST00000562084 TTC7AQ9ULT0 858 aaPredicted RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 DIS3Q9Y2L1 958 aaKnown RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 UTP11Q9Y3A2 253 aaKnown RBP20.35■□□□□ 0.85
BBS4-204ENST00000562084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.35■□□□□ 0.85
BBS4-204ENST00000562084 PPFIA2O75334 1257 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 ATP6V1G2O95670 118 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 SERPINB2P05120 415 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 CLNS1AP54105 237 aaKnown RBP20.34■□□□□ 0.85
BBS4-204ENST00000562084 ELF3P78545 371 aaPredicted RBP20.34■□□□□ 0.85
BBS4-204ENST00000562084 SATB1Q01826 763 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 TMEM119Q4V9L6 283 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 OR2W6PQ8NHA6 318 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 RAB17Q9H0T7 212 aa20.34■□□□□ 0.85
BBS4-204ENST00000562084 PACSIN2Q9UNF0 486 aaPredicted RBP20.34■□□□□ 0.85
BBS4-204ENST00000562084 NOC2LQ9Y3T9 749 aaKnown RBP20.34■□□□□ 0.85
BBS4-204ENST00000562084 TRAF5O00463 557 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 KRIT1O00522 736 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 CYTH3O43739 400 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
BBS4-204ENST00000562084 ATP2B2Q01814 1243 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 PPP4R3CPQ6ZMV5 832 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 SLFN11Q7Z7L1 901 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 ZC3H3Q8IXZ2 948 aaKnown RBP20.33■□□□□ 0.85
BBS4-204ENST00000562084 CUL5Q93034 780 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 GANQ9H2C0 597 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 IL17RBQ9NRM6 502 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 ADAMTS1Q9UHI8 967 aa20.33■□□□□ 0.85
BBS4-204ENST00000562084 SMCO2A6NFE2 343 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 KIF3CO14782 793 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 SLC26A4O43511 780 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 SCP2P22307 547 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 MECOMQ03112 1051 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 CALCRLQ16602 461 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 KRT79Q5XKE5 535 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 NBPF5PQ86XG9 351 aaPredicted RBP20.33■□□□□ 0.84
BBS4-204ENST00000562084 SLC12A4Q9UP95 1085 aa20.33■□□□□ 0.84
BBS4-204ENST00000562084 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.33■□□□□ 0.84
BBS4-204ENST00000562084 NRXN2Q9P2S2 1712 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 PPP1R12AO14974 1030 aaPredicted RBP20.32■□□□□ 0.84
BBS4-204ENST00000562084 NTSR2O95665 410 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 NUDT17P0C025 328 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 GBP2P32456 591 aaPredicted RBP20.32■□□□□ 0.84
BBS4-204ENST00000562084 SPRED3Q2MJR0 410 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 DDX12PQ92771 950 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 PGM2Q96G03 612 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 SGIP1Q9BQI5 828 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 NEUROG2Q9H2A3 272 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 CCDC134Q9H6E4 229 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 EBF2Q9HAK2 575 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 NOD2Q9HC29 1040 aa20.32■□□□□ 0.84
BBS4-204ENST00000562084 FLOT1O75955 427 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 PRKCIP41743 596 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 PTGER2P43116 358 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 RNASE9P60153 205 aaKnown RBP20.31■□□□□ 0.84
BBS4-204ENST00000562084 DHX9Q08211 1270 aaKnown RBP20.31■□□□□ 0.84
BBS4-204ENST00000562084 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 C12orf60Q5U649 245 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 DYMQ7RTS9 669 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 TXLNGYQ9BZA5 131 aa20.31■□□□□ 0.84
BBS4-204ENST00000562084 NSRP1Q9H0G5 558 aaKnown RBP20.31■□□□□ 0.84
BBS4-204ENST00000562084 BMP2KQ9NSY1 1161 aaPredicted RBP20.31■□□□□ 0.84
BBS4-204ENST00000562084 CCDC189A1A4V9 331 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 F8W031 263 aaPredicted RBP20.3■□□□□ 0.84
BBS4-204ENST00000562084 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
BBS4-204ENST00000562084 CYP2D6P10635 497 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 EPS15P42566 896 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 TXKP42681 527 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 FAM26FQ5R3K3 315 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 FBXO33Q7Z6M2 555 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 PIGWQ7Z7B1 504 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 VPS36Q86VN1 386 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 METTL13Q8N6R0 699 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 FAM133AQ8N9E0 248 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 CCDC63Q8NA47 563 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 TPCN2Q8NHX9 752 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 TBCKQ8TEA7 893 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 FAM84BQ96KN1 310 aaPredicted RBP20.3■□□□□ 0.84
BBS4-204ENST00000562084 ZNF317Q96PQ6 595 aaPredicted RBP20.3■□□□□ 0.84
BBS4-204ENST00000562084 PACSIN1Q9BY11 444 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
BBS4-204ENST00000562084 SPON1Q9HCB6 807 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 BSDC1Q9NW68 430 aaPredicted RBP20.3■□□□□ 0.84
BBS4-204ENST00000562084 STXBP5LQ9Y2K9 1186 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 CCDC169A6NNP5 214 aa20.3■□□□□ 0.84
BBS4-204ENST00000562084 DAPK3O43293 454 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms