RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 CMTR1Q8N1G2 835 aaKnown RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 ZBTB38Q8NAP3 1195 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 KRT12Q99456 494 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 ELAC2Q9BQ52 826 aaKnown RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 TRIM7Q9C029 511 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 THAP9Q9H5L6 903 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 SCOCQ9UIL1 159 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 PCDHA13Q9Y5I0 950 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-206ENST00000561781 MMEP08473 750 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 SRGNP10124 158 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 CHRNA5P30532 468 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 DNM2P50570 870 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 NLRP5P59047 1200 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 RASA3Q14644 834 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 TPTE2Q6XPS3 522 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 FAM114A1Q8IWE2 563 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 IQCDQ96DY2 449 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 TLR10Q9BXR5 811 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 FAM192AQ9GZU8 254 aa20.27■□□□□ 0.84
RAB40C-206ENST00000561781 CALB2P22676 271 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 EEF1GP26641 437 aaKnown RBP20.26■□□□□ 0.83
RAB40C-206ENST00000561781 PMS1P54277 932 aaKnown RBP20.26■□□□□ 0.83
RAB40C-206ENST00000561781 TNNC1P63316 161 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 ZRSR2Q15696 482 aaKnown RBP20.26■□□□□ 0.83
RAB40C-206ENST00000561781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.26■□□□□ 0.83
RAB40C-206ENST00000561781 PBKQ96KB5 322 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 RAB3IPQ96QF0 476 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-206ENST00000561781 RNPEPL1Q9HAU8 725 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 PICK1Q9NRD5 415 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 TLCD1Q96CP7 247 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 YIPF2Q9BWQ6 316 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 PREBQ9HCU5 417 aa20.26■□□□□ 0.83
RAB40C-206ENST00000561781 PEX5P50542 639 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 FOXO4P98177 505 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 KRT71Q3SY84 523 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 ASRGL1Q7L266 308 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 ARMCX6Q7L4S7 300 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 LRRC34Q8IZ02 419 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 NLGN2Q8NFZ4 835 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 FERMT2Q96AC1 680 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 EXOC1Q9NV70 894 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 COL4A1P02462 1669 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 DCDC2CA8MYV0 355 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 WNT7AO00755 349 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 SART1O43290 800 aaKnown RBP20.25■□□□□ 0.83
RAB40C-206ENST00000561781 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-206ENST00000561781 MYBP10242 640 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 SCARF1Q14162 830 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 Q4G0T1 1027 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 EARS2Q5JPH6 523 aaKnown RBP20.25■□□□□ 0.83
RAB40C-206ENST00000561781 PDXDC2PQ6P474 469 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 ARHGAP18Q8N392 663 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 RNF10Q8N5U6 811 aaKnown RBP20.25■□□□□ 0.83
RAB40C-206ENST00000561781 MDM1Q8TC05 714 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 UBLCP1Q8WVY7 318 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-206ENST00000561781 ZNF594Q96JF6 807 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-206ENST00000561781 CCDC134Q9H6E4 229 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 CTTNBP2NLQ9P2B4 639 aa20.25■□□□□ 0.83
RAB40C-206ENST00000561781 DEXIO95424 95 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 RPN1P04843 607 aaKnown RBP20.24■□□□□ 0.83
RAB40C-206ENST00000561781 PCCAP05165 728 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-206ENST00000561781 RAD23BP54727 409 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 PCMTD1Q96MG8 357 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-206ENST00000561781 IWS1Q96ST2 819 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 SALL4Q9UJQ4 1053 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 CHN1P15882 459 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 LIFRP42702 1097 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 PABPC4Q13310 644 aaKnown RBP eCLIP20.24■□□□□ 0.83
RAB40C-206ENST00000561781 TYW1BQ6NUM6 668 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 KIF2BQ8N4N8 673 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 FHDC1Q9C0D6 1143 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-206ENST00000561781 SLC4A7Q9Y6M7 1214 aa20.24■□□□□ 0.83
RAB40C-206ENST00000561781 ZAP70P43403 619 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 SH3BGRP55822 239 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 EIF3BP55884 814 aaKnown RBP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 TSHZ1Q6ZSZ6 1077 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ATXN2LQ8WWM7 1075 aaKnown RBP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 DNAJC9Q8WXX5 260 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 TSPAN18Q96SJ8 248 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 MAGEC2Q9UBF1 373 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 RAD51CO43502 376 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ECHS1P30084 290 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ADORA1P30542 326 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 PLS1Q14651 629 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 KLHDC7AQ5VTJ3 777 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 PI16Q6UXB8 463 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 RNF168Q8IYW5 571 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ADSSL1Q8N142 457 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ANKRD13CQ8N6S4 541 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 TUBGCP2Q9BSJ2 902 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 PHACTR1Q9C0D0 580 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 NYXQ9GZU5 481 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ARHGAP20Q9P2F6 1191 aa20.23■□□□□ 0.83
RAB40C-206ENST00000561781 BIN2Q9UBW5 565 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-206ENST00000561781 ANKRD31Q8N7Z5 1873 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms