RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 MTFR1LQ9H019 292 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 RSPH10B2B2RC85 870 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 RSPH10BP0C881 870 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 TCP1P17987 556 aaKnown RBP17.85■□□□□ 0.45
AP4E1-205ENST00000561393 HOXA7P31268 230 aaPredicted RBP17.85■□□□□ 0.45
AP4E1-205ENST00000561393 ZC2HC1CQ53FD0 456 aaPredicted RBP17.85■□□□□ 0.45
AP4E1-205ENST00000561393 SWSAP1Q6NVH7 229 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 FBXO38Q6PIJ6 1188 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 MRIQ9BWK5 157 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 SRGAP2O75044 1071 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 HIP1RO75146 1068 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 SERPING1P05155 500 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 PSAPP07602 524 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 GFPT1Q06210 699 aaPredicted RBP17.85■□□□□ 0.45
AP4E1-205ENST00000561393 KSR1Q8IVT5 923 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 NRBP2Q9NSY0 501 aa17.85■□□□□ 0.45
AP4E1-205ENST00000561393 A0A1W2PRG0 241 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
AP4E1-205ENST00000561393 KRT19P08727 400 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 MARK3P27448 753 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 MXI1P50539 228 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 TGFB2P61812 414 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 MIS18BP1Q6P0N0 1132 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 KCNH7Q9NS40 1196 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 ROBO3Q96MS0 1386 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 NFIBO00712 420 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 ARP10275 920 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 KCNJ6P48051 423 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 FKBP1AP62942 108 aaKnown RBP17.84■□□□□ 0.45
AP4E1-205ENST00000561393 KRT76Q01546 638 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 DNAJC21Q5F1R6 531 aaKnown RBP17.84■□□□□ 0.45
AP4E1-205ENST00000561393 GLIS2Q9BZE0 524 aaPredicted RBP17.84■□□□□ 0.45
AP4E1-205ENST00000561393 UBE2TQ9NPD8 197 aaPredicted RBP17.84■□□□□ 0.45
AP4E1-205ENST00000561393 MYH2Q9UKX2 1941 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 YDJCA8MPS7 323 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 FAM86B1E9PN63 330 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 N4BP1O75113 896 aaKnown RBP17.84■□□□□ 0.45
AP4E1-205ENST00000561393 FAM86B2P0C5J1 330 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 PSMC6P62333 389 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 TUFT1Q9NNX1 390 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 BLOC1S4Q9NUP1 217 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 FZD1Q9UP38 647 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 ITGB4P16144 1822 aa17.84■□□□□ 0.45
AP4E1-205ENST00000561393 FERP16591 822 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 RPS12P25398 132 aaKnown RBP17.83■□□□□ 0.45
AP4E1-205ENST00000561393 JAK3P52333 1124 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 NYAP1Q6ZVC0 841 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 FAM83AQ86UY5 434 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 MKL1Q969V6 931 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 TAAR1Q96RJ0 339 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 PSMD1Q99460 953 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 ACAD9Q9H845 621 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 CEP72Q9P209 647 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 TRIM10Q9UDY6 481 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 TFR2Q9UP52 801 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 ITIH6Q6UXX5 1313 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 GCLMP48507 274 aa17.83■□□□□ 0.45
AP4E1-205ENST00000561393 ALKBH5Q6P6C2 394 aaKnown RBP17.83■□□□□ 0.45
AP4E1-205ENST00000561393 ADAT2Q7Z6V5 191 aaKnown RBP17.83■□□□□ 0.45
AP4E1-205ENST00000561393 BZW2Q9Y6E2 419 aaKnown RBP17.83■□□□□ 0.45
AP4E1-205ENST00000561393 VIL1P09327 827 aaKnown RBP17.83■□□□□ 0.44
AP4E1-205ENST00000561393 DESP17661 470 aa17.83■□□□□ 0.44
AP4E1-205ENST00000561393 STXBP2Q15833 593 aa17.83■□□□□ 0.44
AP4E1-205ENST00000561393 KIAA0895Q8NCT3 520 aa17.83■□□□□ 0.44
AP4E1-205ENST00000561393 MXRA8Q9BRK3 442 aa17.83■□□□□ 0.44
AP4E1-205ENST00000561393 KCNG1Q9UIX4 513 aa17.83■□□□□ 0.44
AP4E1-205ENST00000561393 TSKSQ9UJT2 592 aa17.83■□□□□ 0.44
AP4E1-205ENST00000561393 SIPA1L3O60292 1781 aaPredicted RBP17.83■□□□□ 0.44
AP4E1-205ENST00000561393 NR3C2P08235 984 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 CD19P15391 556 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 SND1Q7KZF4 910 aaKnown RBP eCLIP17.82■□□□□ 0.44
AP4E1-205ENST00000561393 TEX13BQ9BXU2 312 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 C1orf112Q9NSG2 853 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 HDAC6Q9UBN7 1215 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 AMFRQ9UKV5 643 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 NEK9Q8TD19 979 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 MTMR9Q96QG7 549 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 CEP83Q9Y592 693 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 MRPS25P82663 173 aaKnown RBP17.82■□□□□ 0.44
AP4E1-205ENST00000561393 SMC1AQ14683 1233 aaKnown RBP17.82■□□□□ 0.44
AP4E1-205ENST00000561393 RPGRIP1Q96KN7 1286 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 PARD6BQ9BYG5 372 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 ICAM1P05362 532 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 PSMC5P62195 406 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 NAA35Q5VZE5 725 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 C4orf32Q8N8J7 132 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 RUSC1Q9BVN2 902 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
AP4E1-205ENST00000561393 ZHX1Q9UKY1 873 aaPredicted RBP17.82■□□□□ 0.44
AP4E1-205ENST00000561393 PDXKO00764 312 aa17.81■□□□□ 0.44
AP4E1-205ENST00000561393 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
AP4E1-205ENST00000561393 NT5C1BQ96P26 610 aa17.81■□□□□ 0.44
AP4E1-205ENST00000561393 SEL1LQ9UBV2 794 aa17.81■□□□□ 0.44
AP4E1-205ENST00000561393 DNAJC12Q9UKB3 198 aa17.81■□□□□ 0.44
AP4E1-205ENST00000561393 NID2Q14112 1375 aa17.81■□□□□ 0.44
AP4E1-205ENST00000561393 BAZ2AQ9UIF9 1905 aaKnown RBP17.81■□□□□ 0.44
AP4E1-205ENST00000561393 PPP1R11O60927 126 aaPredicted RBP17.81■□□□□ 0.44
AP4E1-205ENST00000561393 ACTN1P12814 892 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms