RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 TREHO43280 583 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 CXCL10P02778 98 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 CA3P07451 260 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 NAPAP54920 295 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 WDR5P61964 334 aaKnown RBP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PTK7Q13308 1070 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 NEDD9Q14511 834 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 UTP14CQ5TAP6 766 aaKnown RBP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 SYNE3Q6ZMZ3 975 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 SERINC5Q86VE9 423 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 CCDC155Q8N6L0 562 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 LMBR1Q8WVP7 490 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 BRF1Q92994 677 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 GPRASP2Q96D09 838 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 SENP7Q9BQF6 1050 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 FTOQ9C0B1 505 aaKnown RBP eCLIP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 RNPEPQ9H4A4 650 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 RIC8AQ9NPQ8 531 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 MSRAQ9UJ68 235 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 NAP1L2Q9ULW6 460 aaPredicted RBP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PCDHA11Q9Y5I1 949 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 V9GY48 417 aaPredicted RBP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 C5orf42Q9H799 3197 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ARID2Q68CP9 1835 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 C17orf102A2RUQ5 167 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 LCHNA4D1U4 455 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 RFXAPO00287 272 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 TLL1O43897 1013 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ACTN1P12814 892 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 TCF7P36402 384 aaPredicted RBP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 METAP2P50579 478 aaKnown RBP eCLIP8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ADCY7P51828 1080 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 RCAN1P53805 252 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ADAM17P78536 824 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 MTMR1Q13613 665 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PKN1Q16512 942 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 XRRA1Q6P2D8 792 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 CNKSR3Q6P9H4 555 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 BLOC1S2Q6QNY1 142 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 HERC6Q8IVU3 1022 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ATP6V0A1Q93050 837 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PHKBQ93100 1093 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ZBTB10Q96DT7 871 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 SLC9A7Q96T83 725 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 PCYT2Q99447 389 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 ANO3Q9BYT9 981 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 AGXT2Q9BYV1 514 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 CERS4Q9HA82 394 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 JADE2Q9NQC1 790 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 SETD4Q9NVD3 440 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 BARHL2Q9NY43 387 aa8.48□□□□□ -1.05
ZEB1-223ENST00000561304 FNDC1Q4ZHG4 1894 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 SMCO2A6NFE2 343 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 DLL1O00548 723 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 BAIAP3O94812 1187 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 CTSHP09668 335 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 ARP10275 920 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 MARK3P27448 753 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 THPOP40225 353 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 ITGB3BPQ13352 177 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 TOB2Q14106 344 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 NTRK3Q16288 839 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 PFKFB3Q16875 520 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 Q6ZNB5 142 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 RUFY4Q6ZNE9 571 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 NLRX1Q86UT6 975 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 CRYGNQ8WXF5 182 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 UIMC1Q96RL1 719 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 SPSB2Q99619 263 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 MXRA8Q9BRK3 442 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 USP26Q9BXU7 913 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 SLC28A3Q9HAS3 691 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
ZEB1-223ENST00000561304 SLC27A5Q9Y2P5 690 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 TTC3P53804 2025 aa8.47□□□□□ -1.05
ZEB1-223ENST00000561304 PLXNA4Q9HCM2 1894 aa8.46□□□□□ -1.05
ZEB1-223ENST00000561304 CUL9Q8IWT3 2517 aa8.46□□□□□ -1.05
ZEB1-223ENST00000561304 HOXA2O43364 376 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 LGR5O75473 907 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 REC8O95072 547 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 SCG2P13521 617 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 SREBF1P36956 1147 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 CCT2P78371 535 aaKnown RBP8.46□□□□□ -1.06
ZEB1-223ENST00000561304 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 FGD1P98174 961 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 TAP1Q03518 808 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 CCDC85BQ15834 202 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-223ENST00000561304 JAKMIP3Q5VZ66 844 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 KRT40Q6A162 431 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 FBXL16Q8N461 479 aa8.46□□□□□ -1.06
ZEB1-223ENST00000561304 PHOSPHO2Q8TCD6 241 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms