RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TRPC6Q9Y210 931 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 SAMM50Q9Y512 469 aa15.69■□□□□ 0.1
TPM1-230ENST00000561266 MCM7P33993 719 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 THPOP40225 353 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 PPP2R5CQ13362 524 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 SAFBQ15424 915 aaKnown RBP eCLIP15.68■□□□□ 0.1
TPM1-230ENST00000561266 LRIT3Q3SXY7 679 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 FAM160B1Q5W0V3 765 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 OTOP2Q7RTS6 562 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 MIER3Q7Z3K6 550 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 NOSTRINQ8IVI9 506 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 RETREG2Q8NC44 543 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 ATP8B4Q8TF62 1192 aa15.68■□□□□ 0.1
TPM1-230ENST00000561266 GRXCR1A8MXD5 290 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 TBX3O15119 743 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 HBP1O60381 514 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 CHRNA1P02708 482 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 CTSHP09668 335 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 MTHFD1LQ6UB35 978 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 BANK1Q8NDB2 785 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 DNAJB3Q8WWF6 145 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 CEP89Q96ST8 783 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 SH2D3AQ9BRG2 576 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 TUBE1Q9UJT0 475 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 PCDHB6Q9Y5E3 794 aa15.67■□□□□ 0.1
TPM1-230ENST00000561266 K7ELQ4 463 aaPredicted RBP15.66■□□□□ 0.1
TPM1-230ENST00000561266 FGBP02675 491 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 CXCL10P02778 98 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 GNAT1P11488 350 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 KLRC1P26715 233 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 SLC26A2P50443 739 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 JAK3P52333 1124 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 PRKCEQ02156 737 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 MGAT3Q09327 533 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 CALCRLQ16602 461 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 HERVK_113Q902F9 699 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 SNX21Q969T3 373 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
TPM1-230ENST00000561266 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 MICAL3Q7RTP6 2002 aa15.66■□□□□ 0.1
TPM1-230ENST00000561266 RRN3P2A6NIE6 340 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 RSPH10B2B2RC85 870 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 ZBTB39O15060 712 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 NEMFO60524 1076 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 C22orf31O95567 290 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 RSPH10BP0C881 870 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 SFNP31947 248 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 TXKP42681 527 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 TMEM62Q0P6H9 643 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 TARBP2Q15633 366 aaKnown RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 FAM26DQ5JW98 314 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 TTC38Q5R3I4 469 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 LARP1BQ659C4 914 aaKnown RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 MCTP1Q6DN14 999 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 NCAPH2Q6IBW4 605 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 CKAP2LQ8IYA6 745 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 CCDC155Q8N6L0 562 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 ZNF579Q8NAF0 562 aaKnown RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 RDM1Q8NG50 284 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 NAP1L4Q99733 375 aaKnown RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 FAM49AQ9H0Q0 323 aaPredicted RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 TTC12Q9H892 705 aaPredicted RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.65■□□□□ 0.1
TPM1-230ENST00000561266 PCDHA2Q9Y5H9 948 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 ARID2Q68CP9 1835 aa15.65■□□□□ 0.1
TPM1-230ENST00000561266 A0A087WWV3 80 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 OATP04181 439 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 CTTNQ14247 550 aaKnown RBP15.64■□□□□ 0.09
TPM1-230ENST00000561266 ZNF484Q5JVG2 852 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 PSRC1Q6PGN9 363 aaPredicted RBP15.64■□□□□ 0.09
TPM1-230ENST00000561266 RPAINQ86UA6 219 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 RPUSD2Q8IZ73 545 aaKnown RBP15.64■□□□□ 0.09
TPM1-230ENST00000561266 KIAA0319LQ8IZA0 1049 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 CDHR5Q9HBB8 845 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 TCEAL9Q9UHQ7 104 aa15.64■□□□□ 0.09
TPM1-230ENST00000561266 COL1A2P08123 1366 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 POTEMA6NI47 508 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 RFC2P35250 354 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 CYP4A11Q02928 519 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
TPM1-230ENST00000561266 DRP2Q13474 957 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
TPM1-230ENST00000561266 EPHA7Q15375 998 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 IL17AQ16552 155 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 PLA2G4FQ68DD2 849 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 ANO5Q75V66 913 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 TMCO2Q7Z6W1 182 aaPredicted RBP15.63■□□□□ 0.09
TPM1-230ENST00000561266 SLFN12Q8IYM2 578 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 FTOQ9C0B1 505 aaKnown RBP eCLIP15.63■□□□□ 0.09
TPM1-230ENST00000561266 PCDHA12Q9UN75 941 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 CDY2AQ9Y6F7 541 aa15.63■□□□□ 0.09
TPM1-230ENST00000561266 DDX11L8A8MPP1 907 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 MARCH6O60337 910 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 SLITRK3O94933 977 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 BAG4O95429 457 aaKnown RBP15.62■□□□□ 0.09
TPM1-230ENST00000561266 PBX2P40425 430 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms