RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 MICAL3Q7RTP6 2002 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TRIM43BA6NCK2 446 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 POTEMA6NI47 508 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 ZBTB42B2RXF5 422 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 CHMP2AO43633 222 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TIMP1P01033 207 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 OATP04181 439 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 RPLP2P05387 115 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 SPATA31C1P0DKV0 1188 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 XRCC6P12956 609 aaKnown RBP eCLIP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 MARK3P27448 753 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 RPA1P27694 616 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TECP42680 631 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 NASPP49321 788 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 PPFIA1Q13136 1202 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 PKP1Q13835 747 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 SF3A1Q15459 793 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TARBP2Q15633 366 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 GRIK4Q16099 956 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 IL17AQ16552 155 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 UGCGQ16739 394 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TMEM266Q2M3C6 531 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TRIM71Q2Q1W2 868 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 XKR3Q5GH77 459 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 PRPF38BQ5VTL8 546 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 NCAPH2Q6IBW4 605 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 FAM173BQ6P4H8 233 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 DTHD1Q6ZMT9 781 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 LMBR1Q8WVP7 490 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 CEP89Q96ST8 783 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 EIF2AK1Q9BQI3 630 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 POLR3CQ9BUI4 534 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 NOC4LQ9BVI4 516 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 ZSWIM4Q9H7M6 989 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TUFT1Q9NNX1 390 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 SETD4Q9NVD3 440 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 PPME1Q9Y570 386 aa10.81□□□□□ -0.68
RABGGTA-221ENST00000561055 TREHO43280 583 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 SLC26A4O43511 780 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 CAND2O75155 1236 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 CHMP4BP1P59074 171 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 ZNF200P98182 395 aaPredicted RBP10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 PRKCEQ02156 737 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 BFSP2Q13515 415 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 SLC39A14Q15043 492 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 TAF2Q6P1X5 1199 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 KCTD17Q8N5Z5 321 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 CAGE1Q8TC20 777 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 PPP1R13LQ8WUF5 828 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 DHX38Q92620 1227 aaKnown RBP10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 DYDC2Q96IM9 177 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 AK8Q96MA6 479 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 RGL1Q9NZL6 768 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 WRAP73Q9P2S5 460 aaPredicted RBP10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 LRWD1Q9UFC0 647 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 PRKAG2Q9UGJ0 569 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 TRPC6Q9Y210 931 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 PCDHA2Q9Y5H9 948 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 CLIC4Q9Y696 253 aa10.8□□□□□ -0.68
RABGGTA-221ENST00000561055 SMIM35A0A1B0GVV1 85 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 H0YGN5 161 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 MAGEB2O15479 319 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 PARNO95453 639 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 YEATS4O95619 227 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 CYP2C9P11712 490 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 RAG1P15918 1043 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 ITGB8P26012 769 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 KLRC1P26715 233 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 LONP1P36776 959 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 ANP32AP39687 249 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 FAM26DQ5JW98 314 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 HYIQ5T013 277 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 HAUS3Q68CZ6 603 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 MFSD5Q6N075 450 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 MTHFD1LQ6UB35 978 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 ANO5Q75V66 913 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 CATSPER3Q86XQ3 398 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 CKAP2LQ8IYA6 745 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 NME8Q8N427 588 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 CCDC155Q8N6L0 562 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 LINC00301Q8NCQ3 95 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 ZNF396Q96N95 335 aaPredicted RBP10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 USP28Q96RU2 1077 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 LXNQ9BS40 222 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 ANKEF1Q9NU02 776 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 TUBE1Q9UJT0 475 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 NOD1Q9Y239 953 aa10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 SRPRBQ9Y5M8 271 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-221ENST00000561055 PTPRSQ13332 1948 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 IGKV6-21A0A0C4DH24 114 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 PPP6R2O75170 966 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 MED24O75448 989 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms