RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
HERC1-210ENST00000560897 KIAA1841Q6NSI8 718 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 OTOP3Q7RTS5 596 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 TMC7Q7Z402 723 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 COLGALT1Q8NBJ5 622 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 LINC01599Q8WXQ3 324 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
HERC1-210ENST00000560897 GPR20Q99678 358 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 USP18Q9UMW8 372 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
HERC1-210ENST00000560897 HIDE1A8MVS5 230 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 SPTLC1O15269 473 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
HERC1-210ENST00000560897 WEE2P0C1S8 567 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 MRPS6P82932 125 aaKnown RBP11.1□□□□□ -0.63
HERC1-210ENST00000560897 KRT17Q04695 432 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 NONOQ15233 471 aaKnown RBP eCLIP11.1□□□□□ -0.63
HERC1-210ENST00000560897 GNPTABQ3T906 1256 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 RRP12Q5JTH9 1297 aaKnown RBP11.1□□□□□ -0.63
HERC1-210ENST00000560897 GPATCH4Q5T3I0 446 aaKnown RBP11.1□□□□□ -0.63
HERC1-210ENST00000560897 IER5Q5VY09 327 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 CCDC149Q6ZUS6 474 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 HCFC2Q9Y5Z7 792 aa11.1□□□□□ -0.63
HERC1-210ENST00000560897 FRYLO94915 3013 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
HERC1-210ENST00000560897 CFHP08603 1231 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 CCND2P30279 289 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 PPM1AP35813 382 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 NOVP48745 357 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 PLCB3Q01970 1234 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 SP2Q02086 613 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
HERC1-210ENST00000560897 NEDD9Q14511 834 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
HERC1-210ENST00000560897 PPM1JQ5JR12 505 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 METTL7BQ6UX53 244 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 TRIM50Q86XT4 487 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 SUMF1Q8NBK3 374 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 PDCD2LQ9BRP1 358 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 TBC1D17Q9HA65 648 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 WNT16Q9UBV4 365 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 TUBE1Q9UJT0 475 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
HERC1-210ENST00000560897 SQORQ9Y6N5 450 aa11.09□□□□□ -0.63
HERC1-210ENST00000560897 FASNP49327 2511 aaKnown RBP11.09□□□□□ -0.63
HERC1-210ENST00000560897 GPR179Q6PRD1 2367 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 SARSP49591 514 aaKnown RBP11.08□□□□□ -0.64
HERC1-210ENST00000560897 ADAM17P78536 824 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 RTN4RL1Q86UN2 441 aaPredicted RBP11.08□□□□□ -0.64
HERC1-210ENST00000560897 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 AGO3Q9H9G7 860 aaKnown RBP11.08□□□□□ -0.64
HERC1-210ENST00000560897 KCNK12Q9HB15 430 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 TYW1Q9NV66 732 aaKnown RBP11.08□□□□□ -0.64
HERC1-210ENST00000560897 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 GMEB2Q9UKD1 530 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 ANGPTL2Q9UKU9 493 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 PADI3Q9ULW8 664 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 CA14Q9ULX7 337 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 TRPV2Q9Y5S1 764 aa11.08□□□□□ -0.64
HERC1-210ENST00000560897 DENND3A2RUS2 1198 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 ORC4O43929 436 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 DCNP07585 359 aaKnown RBP11.07□□□□□ -0.64
HERC1-210ENST00000560897 GOLGA8HP0CJ92 632 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 ARP10275 920 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 SP4Q02446 784 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 PGM5Q15124 567 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 GRIK4Q16099 956 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
HERC1-210ENST00000560897 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 SIT1Q9Y3P8 196 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 CACNA1IQ9P0X4 2223 aa11.07□□□□□ -0.64
HERC1-210ENST00000560897 CLASP2O75122 1294 aaKnown RBP11.06□□□□□ -0.64
HERC1-210ENST00000560897 SNHG28P0DPA3 235 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 NFX1Q12986 1120 aaKnown RBP11.06□□□□□ -0.64
HERC1-210ENST00000560897 QRICH1Q2TAL8 776 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 CABP7Q86V35 215 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 C12orf76Q8N812 135 aaPredicted RBP11.06□□□□□ -0.64
HERC1-210ENST00000560897 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.64
HERC1-210ENST00000560897 TTC14Q96N46 770 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 ZNF558Q96NG5 402 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 CPVLQ9H3G5 476 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 ATP6V0A4Q9HBG4 840 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 C1orf112Q9NSG2 853 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 MAP3K20Q9NYL2 800 aaKnown RBP11.06□□□□□ -0.64
HERC1-210ENST00000560897 SMG5Q9UPR3 1016 aaKnown RBP11.06□□□□□ -0.64
HERC1-210ENST00000560897 PCDHA1Q9Y5I3 950 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms