RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 DLX3O60479 287 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 MSCO60682 206 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 FAM153BP0C7A2 387 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 KCNJ6P48051 423 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 HTRA3P83110 453 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 SSRP1Q08945 709 aaKnown RBP5.6□□□□□ -1.51
TMOD3-207ENST00000560549 IFRD2Q12894 506 aaPredicted RBP5.6□□□□□ -1.51
TMOD3-207ENST00000560549 PTPROQ16827 1216 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 YOD1Q5VVQ6 348 aaPredicted RBP5.6□□□□□ -1.51
TMOD3-207ENST00000560549 CCDC146Q8IYE0 955 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 ADGRG2Q8IZP9 1017 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 USP33Q8TEY7 942 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 NOX5Q96PH1 765 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 IER2Q9BTL4 223 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 BRINP2Q9C0B6 783 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 RNF38Q9H0F5 515 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 EPN3Q9H201 632 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 METTL14Q9HCE5 456 aaKnown RBP5.6□□□□□ -1.51
TMOD3-207ENST00000560549 LUC7LQ9NQ29 371 aaKnown RBP5.6□□□□□ -1.51
TMOD3-207ENST00000560549 TMEM260Q9NX78 707 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 NPFFR2Q9Y5X5 522 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 PTCH2Q9Y6C5 1203 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 YTHDC2Q9H6S0 1430 aaKnown RBP5.6□□□□□ -1.51
TMOD3-207ENST00000560549 EVC2Q86UK5 1308 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 KDM2BQ8NHM5 1336 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 ZNF521Q96K83 1311 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 ARHGAP23Q9P227 1491 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 ALKQ9UM73 1620 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 SLIT1O75093 1534 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 LOC102724159A0A0B4J2E5 919 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 A0A1B0GTL3 188 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 B8ZZF3 427 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 TNNT2P45379 298 aaPredicted RBP5.59□□□□□ -1.51
TMOD3-207ENST00000560549 FOXO4P98177 505 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 PWP2Q15269 919 aaKnown RBP5.59□□□□□ -1.51
TMOD3-207ENST00000560549 TARBP2Q15633 366 aaKnown RBP5.59□□□□□ -1.51
TMOD3-207ENST00000560549 NTRK3Q16288 839 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 TKFCQ3LXA3 575 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 ERICH6BQ5W0A0 696 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 CABP7Q86V35 215 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 MORC1Q86VD1 984 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 SYT8Q8NBV8 401 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 FNIP1Q8TF40 1166 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 SPATA9Q9BWV2 254 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 PPARGC1AQ9UBK2 798 aaKnown RBP5.59□□□□□ -1.51
TMOD3-207ENST00000560549 RIPOR2Q9Y4F9 1068 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 X6R8D5 127 aa5.59□□□□□ -1.51
TMOD3-207ENST00000560549 METP08581 1390 aa5.59□□□□□ -1.52
TMOD3-207ENST00000560549 TMEM2Q9UHN6 1383 aa5.59□□□□□ -1.52
TMOD3-207ENST00000560549 QRICH2Q9H0J4 1663 aa5.59□□□□□ -1.52
TMOD3-207ENST00000560549 CPP00450 1065 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 C8BP07358 591 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 NCAM1P13591 858 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 PFKLP17858 780 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 RPL11P62913 178 aaKnown RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 IGBP1P78318 339 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 RBM10P98175 930 aaKnown RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 KCNAB2Q13303 367 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 WDR43Q15061 677 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 CEP68Q76N32 757 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 FAM26EQ8N5C1 309 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 THAP3Q8WTV1 239 aaPredicted RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 OSBP2Q969R2 916 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 PEX11GQ96HA9 241 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 CDK19Q9BWU1 502 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 FANCLQ9NW38 375 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 POGKQ9P215 609 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 RCAN3Q9UKA8 241 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 PCDHA2Q9Y5H9 948 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 TIMM13Q9Y5L4 95 aaPredicted RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 EID1Q9Y6B2 187 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 MED14O60244 1454 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 ARHGEF28Q8N1W1 1705 aaKnown RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 NPHP4O75161 1426 aaPredicted RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 OTOL1A6NHN0 477 aaPredicted RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 HSD3B2P26439 372 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 LTBRP36941 435 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 RRP1P56182 461 aaKnown RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 MAP4K2Q12851 820 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 PLEKHG4Q58EX7 1191 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 SP8Q8IXZ3 490 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 ZNF526Q8TF50 670 aaPredicted RBP5.58□□□□□ -1.52
TMOD3-207ENST00000560549 RELTQ969Z4 430 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 EXOC2Q96KP1 924 aa5.58□□□□□ -1.52
TMOD3-207ENST00000560549 CD163L1Q9NR16 1453 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 POLR3AO14802 1390 aaPredicted RBP5.57□□□□□ -1.52
TMOD3-207ENST00000560549 ANKRD36BQ8N2N9 1353 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 BLACEA4D250 179 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 APAF1O14727 1248 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 PLIN1O60240 522 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 MTHFSP49914 203 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 CCDC181Q5TID7 509 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 IQCEQ6IPM2 695 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 KCNT2Q6UVM3 1135 aa5.57□□□□□ -1.52
TMOD3-207ENST00000560549 KIAA0907Q7Z7F0 614 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms