RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CACNA1IQ9P0X4 2223 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 DOCK8Q8NF50 2099 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 GSTTP1A0A1W2PQM5 241 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 PALM3A6NDB9 673 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 ZNF213O14771 459 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 FIBPO43427 364 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 ATP9AO75110 1047 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 TMEM62Q0P6H9 643 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 APOBRQ0VD83 1088 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 MTMR3Q13615 1198 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 FAM102BQ5T8I3 360 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 LLGL2Q6P1M3 1020 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 PIGSQ96S52 555 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 TMEM260Q9NX78 707 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 LRFN2Q9ULH4 789 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 NR2E1Q9Y466 385 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 WDR87Q6ZQQ6 2873 aa10.34□□□□□ -0.75
RABGGTA-217ENST00000560521 IGSF9BQ9UPX0 1349 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 MIA3Q5JRA6 1907 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 DOCK6Q96HP0 2047 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 FSD2A1L4K1 749 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 HIDE1A8MVS5 230 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 PI15O43692 258 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 ASGR2P07307 311 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 MARK3P27448 753 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 CLCN5P51795 746 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 IGBP1P78318 339 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 SPOUT1Q5T280 376 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 IER5Q5VY09 327 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 PLPP4Q5VZY2 271 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 MCTP2Q6DN12 878 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 PDE12Q6L8Q7 609 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 HOMER1Q86YM7 354 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 COLGALT1Q8NBJ5 622 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 RMDN1Q96DB5 314 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 POMKQ9H5K3 350 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 CWH43Q9H720 699 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 TYW1Q9NV66 732 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 PCDHB7Q9Y5E2 793 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 TRPV2Q9Y5S1 764 aa10.33□□□□□ -0.76
RABGGTA-217ENST00000560521 TBKBP1A7MCY6 615 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 CYTH3O43739 400 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 MGEA5O60502 916 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 KRT37O76014 449 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 SRGAP2BP0DMP2 458 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 INSRRP14616 1297 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 HOXB8P17481 243 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 SARSP49591 514 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 NT5C2P49902 561 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 PDE1AP54750 535 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 PAK2Q13177 524 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 SEC23AQ15436 765 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 TMEM266Q2M3C6 531 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 CWF19L1Q69YN2 538 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 TICAM2Q86XR7 235 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 THNSL1Q8IYQ7 743 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 CELF4Q9BZC1 486 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 RCAN3Q9UKA8 241 aa10.32□□□□□ -0.76
RABGGTA-217ENST00000560521 RRN3P2A6NIE6 340 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 KCNA2P16389 499 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 NPR3P17342 541 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 PLCB3Q01970 1234 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 IFIT1BQ5T764 474 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 PCNX4Q63HM2 1172 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 GIMAP8Q8ND71 665 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 TRAPPC12Q8WVT3 735 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 MRPS27Q92552 414 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 GLG1Q92896 1179 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 PCYT2Q99447 389 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 TCF25Q9BQ70 676 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 ADAM7Q9H2U9 754 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 MFSD1Q9H3U5 465 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 SMARCAD1Q9H4L7 1026 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 LIMD1Q9UGP4 676 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 LZTS1Q9Y250 596 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 PCDHA2Q9Y5H9 948 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 KMT2BQ9UMN6 2715 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 KDM3AQ9Y4C1 1321 aa10.31□□□□□ -0.76
RABGGTA-217ENST00000560521 RALGAPA1Q6GYQ0 2036 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 PNMA6FA0A0J9YX94 578 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 C9IYK1 514 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 M0QZ92 97 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 RPLP2P05387 115 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 WEE2P0C1S8 567 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ITIH3Q06033 890 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 TRAF1Q13077 416 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ANGPT1Q15389 498 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 ANKRD45Q5TZF3 282 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 USP17L6PQ6QN14 398 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 LRRC55Q6ZSA7 311 aa10.3□□□□□ -0.76
RABGGTA-217ENST00000560521 DGLUCYQ7Z3D6 616 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms