RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 EIF3JO75822 258 aaKnown RBP7.48□□□□□ -1.21
IRF9-208ENST00000560311 CD4P01730 458 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 ZNF286BP0CG31 522 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 RAG1P15918 1043 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 CASTP20810 708 aaKnown RBP7.48□□□□□ -1.21
IRF9-208ENST00000560311 RPS6KB1P23443 525 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 METAP2P50579 478 aaKnown RBP eCLIP7.48□□□□□ -1.21
IRF9-208ENST00000560311 FPGSQ05932 587 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 APOBRQ0VD83 1088 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 UBE2SQ16763 222 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 LRIT3Q3SXY7 679 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 C9orf50Q5SZB4 431 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 BLOC1S2Q6QNY1 142 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 Q6ZUG5 572 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 CCDC82Q8N4S0 544 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 SMARCC2Q8TAQ2 1214 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 AFG1LQ8WV93 481 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 BRF1Q92994 677 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 CUL5Q93034 780 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 ARHGAP9Q9BRR9 750 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 PPP1R12CQ9BZL4 782 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 ALDH8A1Q9H2A2 487 aaPredicted RBP7.48□□□□□ -1.21
IRF9-208ENST00000560311 LIMD1Q9UGP4 676 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 hCG_1984214I3L0E3 225 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 MEIS2O14770 477 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 EPB41L2O43491 1005 aaKnown RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 KPNA6O60684 536 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 GGPS1O95749 300 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 TIMP1P01033 207 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 CDC27P30260 824 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 EPHB4P54760 987 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 NAPAP54920 295 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 SNRPNP63162 240 aaKnown RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 DBN1Q16643 649 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 GNPTABQ3T906 1256 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 FAM47CQ5HY64 1035 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 USP17L6PQ6QN14 398 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 PRICKLE2Q7Z3G6 844 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 ZNF713Q8N859 430 aaPredicted RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 PPTC7Q8NI37 304 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 PPP1R13LQ8WUF5 828 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 INPP4AQ96PE3 977 aaPredicted RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 NOC4LQ9BVI4 516 aaKnown RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 TRPV6Q9H1D0 765 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 HIPK3Q9H422 1215 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 TRMT13Q9NUP7 481 aaKnown RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 DDX41Q9UJV9 622 aaKnown RBP7.47□□□□□ -1.21
IRF9-208ENST00000560311 UMODL1Q5DID0 1318 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 TANC1Q9C0D5 1861 aa7.47□□□□□ -1.21
IRF9-208ENST00000560311 SMCHD1A6NHR9 2005 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 SPDYE3A6NKU9 549 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 STXBP3O00186 592 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 STAM2O75886 525 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 F2P00734 622 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 HOXD8P13378 290 aaPredicted RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 PSMA5P28066 241 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 CYP2C18P33260 490 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 ADD1P35611 737 aaKnown RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 ADCY7P51828 1080 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 CHMP4BP1P59074 171 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 SEMA3FQ13275 785 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 PPIGQ13427 754 aaKnown RBP eCLIP7.46□□□□□ -1.222e-7■□□□□ 9.1
IRF9-208ENST00000560311 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 SHHQ15465 462 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 DGKDQ16760 1214 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 CELF3Q5SZQ8 465 aaKnown RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 MFSD5Q6N075 450 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 PSRC1Q6PGN9 363 aaPredicted RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 KCNV1Q6PIU1 500 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 DHX37Q8IY37 1157 aaKnown RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 TRIM22Q8IYM9 498 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 KDF1Q8NAX2 398 aaPredicted RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 KAT2BQ92831 832 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 RNPC3Q96LT9 517 aaKnown RBP7.46□□□□□ -1.22
IRF9-208ENST00000560311 SPATA33Q96N06 139 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 KATNAL1Q9BW62 490 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 AGXT2Q9BYV1 514 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 WNT8AQ9H1J5 351 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 PSTPIP2Q9H939 334 aa7.46□□□□□ -1.22
IRF9-208ENST00000560311 MYH6P13533 1939 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 CCDC196A0A1B0GTZ2 297 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 FIBPO43427 364 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 LILRB3O75022 631 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 ADH1AP07327 375 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 CYP2C9P11712 490 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 CSF2RAP15509 400 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 ICAM3P32942 547 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 PTGIRP43119 386 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 RAB15P59190 212 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 SP2Q02086 613 aa7.45□□□□□ -1.22
IRF9-208ENST00000560311 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
IRF9-208ENST00000560311 TOB2Q14106 344 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms