RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 YOD1Q5VVQ6 348 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-218ENST00000560236 BTBD8Q5XKL5 378 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 CSRNP2Q9H175 543 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 OAZ3Q9UMX2 235 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 ACO1P21399 889 aaKnown RBP5.44□□□□□ -1.54
LRRC28-218ENST00000560236 DNAJA1P31689 397 aaKnown RBP5.44□□□□□ -1.54
LRRC28-218ENST00000560236 RRADP55042 308 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 ZMAT1Q5H9K5 638 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 NLGN4XQ8N0W4 816 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 LRRC47Q8N1G4 583 aaKnown RBP5.44□□□□□ -1.54
LRRC28-218ENST00000560236 ST13P5Q8NFI4 369 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-218ENST00000560236 EXTL1Q92935 676 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 ZNF503Q96F45 646 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 DPYSL5Q9BPU6 564 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 TINF2Q9BSI4 451 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 ARHGAP28Q9P2N2 729 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 NR2E1Q9Y466 385 aa5.44□□□□□ -1.54
LRRC28-218ENST00000560236 TSPOAP1O95153 1857 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 ASXL2Q76L83 1435 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 TCRBV5S4A2TA0A5A2 114 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 CDC14BO60729 498 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 ZNF202O95125 648 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 TCF3P15923 654 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 PTPN1P18031 435 aaKnown RBP5.43□□□□□ -1.54
LRRC28-218ENST00000560236 TGFB2P61812 414 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 ABHD18Q0P651 414 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 NOLC1Q14978 699 aaKnown RBP eCLIP5.43□□□□□ -1.54
LRRC28-218ENST00000560236 WDR72Q3MJ13 1102 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 POLNQ7Z5Q5 900 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 SH3RF2Q8TEC5 729 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 SCYL1Q96KG9 808 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 RIC8BQ9NVN3 520 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 SRPK3Q9UPE1 567 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 SYNJ2O15056 1496 aa5.43□□□□□ -1.54
LRRC28-218ENST00000560236 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-218ENST00000560236 FAM90A27PA6NNH2 459 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 KLF4O43474 513 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 ETV4P43268 484 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 PTH1RQ03431 593 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 PAK1Q13153 545 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 GPR19Q15760 415 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 IGFL4Q6B9Z1 124 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 ARHGAP36Q6ZRI8 547 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 Q6ZSN1 163 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 EP400NLQ6ZTU2 488 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 HOMEZQ8IX15 550 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 FAM89AQ96GI7 184 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 OR14A2Q96R54 314 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 C12orf65Q9H3J6 166 aaKnown RBP5.42□□□□□ -1.54
LRRC28-218ENST00000560236 TRAF6Q9Y4K3 522 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 SLC30A1Q9Y6M5 507 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 SNAPC4Q5SXM2 1469 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 ABCC10Q5T3U5 1492 aa5.42□□□□□ -1.54
LRRC28-218ENST00000560236 PBRM1Q86U86 1689 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 ADGRL1O94910 1474 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 HMGCRP04035 888 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 PLA2G12BQ9BX93 195 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 ZDHHC5Q9C0B5 715 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 CATSPERZQ9NTU4 200 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 ATP23Q9Y6H3 246 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 DIP2BQ9P265 1576 aa5.41□□□□□ -1.54
LRRC28-218ENST00000560236 POLA1P09884 1462 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 MAPKBP1O60336 1514 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 AQP7O14520 342 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 PLSCR1O15162 318 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 ARHGAP6O43182 974 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 NARSO43776 548 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 PTGS1P23219 599 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 MCM7P33993 719 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 GJA4P35212 333 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 RPS19P39019 145 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 ADCY8P40145 1251 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 KCNQ1P51787 676 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 DGCR2P98153 550 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 LSM12Q3MHD2 195 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 FIGNQ5HY92 759 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 CXXC5Q7LFL8 322 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 MTDHQ86UE4 582 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 PTRH1Q86Y79 214 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 C1orf210Q8IVY1 113 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 FBXW5Q969U6 566 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 INCENPQ9NQS7 918 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 GALNT8Q9NY28 637 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 PUF60Q9UHX1 559 aaKnown RBP5.4□□□□□ -1.54
LRRC28-218ENST00000560236 FBXO10Q9UK96 956 aa5.4□□□□□ -1.54
LRRC28-218ENST00000560236 TOP2AP11388 1531 aaKnown RBP5.39□□□□□ -1.55
LRRC28-218ENST00000560236 MATN2O00339 956 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 WNT9AO14904 365 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 PDE6AP16499 860 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 KRT15P19012 456 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 IL13RA1P78552 427 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 NFYCQ13952 458 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 RAB33AQ14088 237 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 MAMDC4Q6UXC1 1216 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 MAMDC2Q7Z304 686 aaPredicted RBP5.39□□□□□ -1.55
LRRC28-218ENST00000560236 OSTM1Q86WC4 334 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 PCDH19Q8TAB3 1148 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 ZNF669Q96BR6 464 aaPredicted RBP5.39□□□□□ -1.55
LRRC28-218ENST00000560236 SPATA9Q9BWV2 254 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms