RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 B4GALNT3Q6L9W6 998 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 TMEM184AQ6ZMB5 413 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 CUL5Q93034 780 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 SPZ1Q9BXG8 430 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 S1PR5Q9H228 398 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 PCDHA2Q9Y5H9 948 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 UBIAD1Q9Y5Z9 338 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 KDM3AQ9Y4C1 1321 aa22.72■■□□□ 1.23
RABGGTA-214ENST00000560163 PLXNA3P51805 1871 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 CYP21A2P08686 494 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 ERVFC1P60507 584 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 TMEM62Q0P6H9 643 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 TRDNQ13061 729 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 PTPN21Q16825 1174 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 DUSP6Q16828 381 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 CELF4Q9BZC1 486 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 IRF2BPLQ9H1B7 796 aa22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 FNDC1Q4ZHG4 1894 aaPredicted RBP22.71■■□□□ 1.23
RABGGTA-214ENST00000560163 DCHS1Q96JQ0 3298 aa22.7■■□□□ 1.23
RABGGTA-214ENST00000560163 NUCB1Q02818 461 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 PAK2Q13177 524 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 WTAPQ15007 396 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 IGDCC4Q8TDY8 1250 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 MICAL1Q8TDZ2 1067 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 MAP3K14Q99558 947 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 CDCA3Q99618 268 aaPredicted RBP22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 TLR9Q9NR96 1032 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 TAF6LQ9Y6J9 622 aa22.7■■□□□ 1.22
RABGGTA-214ENST00000560163 ERICH2A1L162 156 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 PROB1E7EW31 1015 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 FSCN2O14926 492 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 MAFGO15525 162 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 SMARCA1P28370 1054 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 SARSP49591 514 aaKnown RBP22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 NUBP1P53384 320 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 MTMR1Q13613 665 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 FAM43BQ6ZT52 329 aaPredicted RBP22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 ATOH1Q92858 354 aaPredicted RBP22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 NEK1Q96PY6 1258 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 PCDHB12Q9Y5F1 795 aa22.69■■□□□ 1.22
RABGGTA-214ENST00000560163 SMIM35A0A1B0GVV1 85 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 FSD2A1L4K1 749 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 MGEA5O60502 916 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 FGF18O76093 207 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 PDGFBP01127 241 aaPredicted RBP22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 CATIPQ7Z7H3 387 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 NME8Q8N427 588 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 RASGRP4Q8TDF6 673 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 TRAPPC12Q8WVT3 735 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 RRP36Q96EU6 259 aaKnown RBP22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 RIPOR3Q96MK2 946 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 JADE2Q9NQC1 790 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 PKD2L1Q9P0L9 805 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 LRFN2Q9ULH4 789 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 WDR87Q6ZQQ6 2873 aa22.68■■□□□ 1.22
RABGGTA-214ENST00000560163 M0QZ92 97 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 ANTXR2P58335 489 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 PLCB4Q15147 1175 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 TMEM266Q2M3C6 531 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 FAM102BQ5T8I3 360 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 PDE12Q6L8Q7 609 aaKnown RBP22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 SYCE2Q6PIF2 218 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 PSTPIP2Q9H939 334 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 ERVK-5Q9HDB9 667 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 PCDHB7Q9Y5E2 793 aa22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 U3KPZ7 1027 aaPredicted RBP22.67■■□□□ 1.22
RABGGTA-214ENST00000560163 E7EWF7 191 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 H0Y858 1186 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 KRT76Q01546 638 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 ANKRD54Q6NXT1 300 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 PLPPR4Q7Z2D5 763 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 TNPO1Q92973 898 aaKnown RBP22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 CWH43Q9H720 699 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 JPH1Q9HDC5 661 aaPredicted RBP22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 AAASQ9NRG9 546 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 RGS18Q9NS28 235 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 TYW1Q9NV66 732 aaKnown RBP22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 HCSTQ9UBK5 93 aa22.66■■□□□ 1.22
RABGGTA-214ENST00000560163 C9IYK1 514 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 IGHDP01880 384 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 FOXK2Q01167 660 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 PTH1RQ03431 593 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 SART3Q15020 963 aaKnown RBP22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 MTHFD1LQ6UB35 978 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 COLGALT1Q8NBJ5 622 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 NCOA7Q8NI08 942 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 RWDD1Q9H446 243 aaPredicted RBP22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 CDHR5Q9HBB8 845 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 TMEM260Q9NX78 707 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 SLC9A2Q9UBY0 812 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 TRPC6Q9Y210 931 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 LZTS1Q9Y250 596 aa22.65■■□□□ 1.22
RABGGTA-214ENST00000560163 TBKBP1A7MCY6 615 aa22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 GALR2O43603 387 aaPredicted RBP22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 NFX1Q12986 1120 aaKnown RBP22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 SLC24A5Q71RS6 500 aa22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 SRBD1Q8N5C6 995 aaKnown RBP22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 TMEM40Q8WWA1 233 aa22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 ADAM2Q99965 735 aa22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 MYL10Q9BUA6 226 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms