RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NIM1KQ8IY84 436 aa4.86□□□□□ -1.63
CASC4-210ENST00000559550 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
CASC4-210ENST00000559550 INTS7Q9NVH2 962 aaKnown RBP4.86□□□□□ -1.63
CASC4-210ENST00000559550 MAGEC2Q9UBF1 373 aaPredicted RBP4.86□□□□□ -1.63
CASC4-210ENST00000559550 B4E1Z4 1266 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 TRAF5O00463 557 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 CLASP2O75122 1294 aaKnown RBP4.85□□□□□ -1.63
CASC4-210ENST00000559550 NPTXRO95502 500 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 PLATP00750 562 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 APPP05067 770 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 ZBTB48P10074 688 aaPredicted RBP4.85□□□□□ -1.63
CASC4-210ENST00000559550 DBPQ10586 325 aaPredicted RBP4.85□□□□□ -1.63
CASC4-210ENST00000559550 PRR31Q5SQ13 230 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 PIK3R6Q5UE93 754 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 OTOP1Q7RTM1 612 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 DDX53Q86TM3 631 aaKnown RBP4.85□□□□□ -1.63
CASC4-210ENST00000559550 LRRTM3Q86VH5 581 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 C2orf69Q8N8R5 385 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 DTX3Q8N9I9 347 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 SH3RF3Q8TEJ3 882 aaPredicted RBP4.85□□□□□ -1.63
CASC4-210ENST00000559550 TARS2Q9BW92 718 aaKnown RBP4.85□□□□□ -1.63
CASC4-210ENST00000559550 PCDH18Q9HCL0 1135 aa4.85□□□□□ -1.63
CASC4-210ENST00000559550 SLC12A8A0AV02 714 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 PRAMEF25A6NGN4 478 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 RASSF10A6NK89 507 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 ZNF839A8K0R7 811 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 CBX4O00257 560 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 KPNA6O60684 536 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 GYS2P54840 703 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 MLLT6P55198 1093 aaPredicted RBP4.84□□□□□ -1.63
CASC4-210ENST00000559550 PFKPQ01813 784 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 PCBP1Q15365 356 aaKnown RBP eCLIP4.84□□□□□ -1.63
CASC4-210ENST00000559550 SKIDA1Q1XH10 827 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 CFAP100Q494V2 611 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 VASNQ6EMK4 673 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 CNNM4Q6P4Q7 775 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 EP400NLQ6ZTU2 488 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 TTLL6Q8N841 843 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 CHST14Q8NCH0 376 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 DLG3Q92796 817 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 TMEM209Q96SK2 561 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 ZNF747Q9BV97 191 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 MTFR1LQ9H019 292 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 SLC39A2Q9NP94 309 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 BTBD7Q9P203 1132 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 PLAAQ9Y263 795 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 B3GALT1Q9Y5Z6 326 aa4.84□□□□□ -1.63
CASC4-210ENST00000559550 A0A087X0B3 334 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 DVL2O14641 736 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 SMARCA5O60264 1052 aaPredicted RBP4.83□□□□□ -1.64
CASC4-210ENST00000559550 FZD7O75084 574 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 KRT37O76014 449 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 MMEP08473 750 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 ENO2P09104 434 aaPredicted RBP4.83□□□□□ -1.64
CASC4-210ENST00000559550 RPL13P26373 211 aaKnown RBP4.83□□□□□ -1.64
CASC4-210ENST00000559550 GJA4P35212 333 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 GLRBP48167 497 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 GJA9P57773 515 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 IRF9Q00978 393 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 PKN3Q6P5Z2 889 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 ZNF761Q86XN6 746 aaPredicted RBP4.83□□□□□ -1.64
CASC4-210ENST00000559550 MFSD3Q96ES6 412 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 WNK4Q96J92 1243 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 CLIC6Q96NY7 704 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 BOCQ9BWV1 1114 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 DLL4Q9NR61 685 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 KCNH7Q9NS40 1196 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 NTMQ9P121 344 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 CROTQ9UKG9 612 aa4.83□□□□□ -1.64
CASC4-210ENST00000559550 PTPDC1A2A3K4 754 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 GSG1L2A8MUP6 293 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 DDX3XO00571 662 aaKnown RBP eCLIP4.82□□□□□ -1.64
CASC4-210ENST00000559550 MPIG6BO95866 241 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 IL18BPO95998 194 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 COL6A1P12109 1028 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 ZNF28P17035 718 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 POU3F2P20265 443 aaPredicted RBP4.82□□□□□ -1.64
CASC4-210ENST00000559550 HSD3B2P26439 372 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 AOAHP28039 575 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 MC4RP32245 332 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 SARSP49591 514 aaKnown RBP4.82□□□□□ -1.64
CASC4-210ENST00000559550 NEK4P51957 841 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 TMEM132BQ14DG7 1078 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 SEPT7Q16181 437 aaKnown RBP4.82□□□□□ -1.64
CASC4-210ENST00000559550 CATSPEREQ5SY80 951 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 CREB3L3Q68CJ9 461 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 TTLL7Q6ZT98 887 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 UBE2R2Q712K3 238 aaPredicted RBP4.82□□□□□ -1.64
CASC4-210ENST00000559550 STPG3Q8N7X2 389 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 ZCCHC14Q8WYQ9 949 aaKnown RBP4.82□□□□□ -1.64
CASC4-210ENST00000559550 B4GALT6Q9UBX8 382 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 ZFP69BQ9UJL9 534 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 TSC22D4Q9Y3Q8 395 aa4.82□□□□□ -1.64
CASC4-210ENST00000559550 ZNF891A8MT65 544 aaPredicted RBP4.81□□□□□ -1.64
CASC4-210ENST00000559550 MYCLP1P12525 358 aaPredicted RBP4.81□□□□□ -1.64
CASC4-210ENST00000559550 IL13P35225 146 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 FLT3P36888 993 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 KLF10Q13118 480 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 PRAMEF18Q5VWM3 479 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms