RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 ARFGAP3Q9NP61 516 aa12.18□□□□□ -0.46
SPG11-217ENST00000559511 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
SPG11-217ENST00000559511 TRAF3IP3Q9Y228 551 aa12.18□□□□□ -0.46
SPG11-217ENST00000559511 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
SPG11-217ENST00000559511 CCDC151A5D8V7 595 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 POLR2FP61218 127 aaKnown RBP12.17□□□□□ -0.46
SPG11-217ENST00000559511 KCNA1Q09470 495 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 DGKZQ13574 1117 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 KIAA1683Q9H0B3 1180 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 TUFT1Q9NNX1 390 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 FAM184BQ9ULE4 1060 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 CAPN6Q9Y6Q1 641 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 ASTN1O14525 1302 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
SPG11-217ENST00000559511 ARP10275 920 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 DMTNQ08495 405 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 KCNH2Q12809 1159 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
SPG11-217ENST00000559511 BRD3Q15059 726 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 BMT2Q1RMZ1 405 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 ARHGAP27Q6ZUM4 889 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 CAPZA3Q96KX2 299 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 FUT8Q9BYC5 575 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 GINM1Q9NU53 330 aa12.17□□□□□ -0.46
SPG11-217ENST00000559511 WRAP73Q9P2S5 460 aaPredicted RBP12.17□□□□□ -0.46
SPG11-217ENST00000559511 ZNF536O15090 1300 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 PDXKO00764 312 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 ZNF185O15231 689 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 ATP8B1O43520 1251 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 USO1O60763 962 aaKnown RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 GAS7O60861 476 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 GCNT3O95395 438 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 MOCS3O95396 460 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 LONRF2Q1L5Z9 754 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 C1orf186Q6ZWK4 172 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 LPAR1Q92633 364 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 GANQ9H2C0 597 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 SALL4Q9UJQ4 1053 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 SSU72P8A0A1W2PR75 194 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 AKAP3O75969 853 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 EPS15P42566 896 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 MAGEA1P43355 309 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 VSNL1P62760 191 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 TUBB4BP68371 445 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 GABPB1Q06547 395 aaPredicted RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 ANGEL2Q5VTE6 544 aaKnown RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 DPY19L2P1Q6NXN4 242 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 FRMD5Q7Z6J6 570 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 IKZF4Q9H2S9 585 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 UNC45AQ9H3U1 944 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 OLFML3Q9NRN5 406 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 TYW1Q9NV66 732 aaKnown RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
SPG11-217ENST00000559511 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
SPG11-217ENST00000559511 ZMYM2Q9UBW7 1377 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 RBAK-RBAKDNI3L0D1 243 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 PJA2O43164 708 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 CALUO43852 315 aaPredicted RBP12.15□□□□□ -0.46
SPG11-217ENST00000559511 NR3C1P04150 777 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 ICAM1P05362 532 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 NMT1P30419 496 aaKnown RBP12.15□□□□□ -0.46
SPG11-217ENST00000559511 CASP4P49662 377 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 HSD17B4P51659 736 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 SLC9C1Q4G0N8 1177 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 BEND6Q5SZJ8 279 aaPredicted RBP12.15□□□□□ -0.46
SPG11-217ENST00000559511 PRAMEF18Q5VWM3 479 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 B3GNT9Q6UX72 402 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 KCTD17Q8N5Z5 321 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 TRIM58Q8NG06 486 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 HNRNPLLQ8WVV9 542 aaKnown RBP12.15□□□□□ -0.46
SPG11-217ENST00000559511 NUCKS1Q9H1E3 243 aaKnown RBP12.15□□□□□ -0.46
SPG11-217ENST00000559511 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 GPRC5DQ9NZD1 345 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 WDR90Q96KV7 1748 aa12.15□□□□□ -0.46
SPG11-217ENST00000559511 PDE2AO00408 941 aaPredicted RBP12.14□□□□□ -0.47
SPG11-217ENST00000559511 NFIBO00712 420 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 CLIC2O15247 247 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 TACC1O75410 805 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 SERPING1P05155 500 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 ACTN1P12814 892 aa12.14□□□□□ -0.47
SPG11-217ENST00000559511 GAP43P17677 238 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms