RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MBLAC1A4D2B0 266 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 POTEMA6NI47 508 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 ZBTB42B2RXF5 422 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 PDIA4P13667 645 aaKnown RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 QARSP47897 775 aaKnown RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 PSMC5P62195 406 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 ATP2C1P98194 919 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 PRKCEQ02156 737 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 IL17AQ16552 155 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 ZNF484Q5JVG2 852 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 PRPF38BQ5VTL8 546 aaKnown RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 FOXD4L5Q5VV16 416 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 FOXD4L4Q8WXT5 416 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 GDF15Q99988 308 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 HSD17B14Q9BPX1 270 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 EIF2AK1Q9BQI3 630 aaKnown RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 NRBP2Q9NSY0 501 aa22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 WRAP73Q9P2S5 460 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-207ENST00000559494 LAD1O00515 517 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 SLITRK3O94933 977 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 OATP04181 439 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 CCL23P55773 120 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 BFSP2Q13515 415 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 CTTNQ14247 550 aaKnown RBP22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 RUFY4Q6ZNE9 571 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 FAM167AQ96KS9 214 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 LBHD1Q9BQE6 289 aaPredicted RBP22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 WNT8AQ9H1J5 351 aa22.78■■□□□ 1.24
TSPAN3-207ENST00000559494 LTBP2Q14767 1821 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 EVPLQ92817 2033 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 ZSCAN22P10073 491 aaPredicted RBP22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 KLRC1P26715 233 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 PRPHP41219 470 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 FXR2P51116 673 aaKnown RBP eCLIP22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 CYP4A11Q02928 519 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 SF3A1Q15459 793 aaKnown RBP22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 CAGE1Q8TC20 777 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 TUBE1Q9UJT0 475 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 CLIC4Q9Y696 253 aa22.77■■□□□ 1.24
TSPAN3-207ENST00000559494 TMEM150BA6NC51 233 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 DDX11L8A8MPP1 907 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 PITPNM1O00562 1244 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 CKBP12277 381 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 RBL2Q08999 1139 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 PDIA5Q14554 519 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 XKR3Q5GH77 459 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 MTHFD1LQ6UB35 978 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 TPH2Q8IWU9 490 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 RETREG2Q8NC44 543 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 LXNQ9BS40 222 aa22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 NIFKQ9BYG3 293 aaKnown RBP22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 FTOQ9C0B1 505 aaKnown RBP eCLIP22.76■■□□□ 1.23
TSPAN3-207ENST00000559494 COL1A2P08123 1366 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 SPATA31C1P0DKV0 1188 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 TARBP2Q15633 366 aaKnown RBP22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 TMEM266Q2M3C6 531 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 DTHD1Q6ZMT9 781 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 ANO5Q75V66 913 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 C4orf19Q8IY42 314 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 IGSF22Q8N9C0 903 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 SCLYQ96I15 445 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 CEP89Q96ST8 783 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 ZSWIM4Q9H7M6 989 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 PCDHA2Q9Y5H9 948 aa22.75■■□□□ 1.23
TSPAN3-207ENST00000559494 ZBTB39O15060 712 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 DKC1O60832 514 aaKnown RBP eCLIP22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 F13A1P00488 732 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 IQCF3P0C7M6 154 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 CSF2RAP15509 400 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 THPOP40225 353 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 PTPAQ15257 358 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 ZNF618Q5T7W0 954 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 ARL6IP4Q66PJ3 421 aaKnown RBP22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 TRAF7Q6Q0C0 670 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 CHRDL2Q6WN34 429 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 TMEM199Q8N511 208 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 CCDC155Q8N6L0 562 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 NEK9Q8TD19 979 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 SH2D3AQ9BRG2 576 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 PRO3102Q9H379 93 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 LRWD1Q9UFC0 647 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 ZDHHC9Q9Y397 364 aa22.74■■□□□ 1.23
TSPAN3-207ENST00000559494 RANBP2P49792 3224 aaKnown RBP22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 MED24O75448 989 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 SELPP16109 830 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 EPHB4P54760 987 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 FPGSQ05932 587 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 TAF2Q6P1X5 1199 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 RPAINQ86UA6 219 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 CATSPER3Q86XQ3 398 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 DNAJB3Q8WWF6 145 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 VWCEQ96DN2 955 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 USP28Q96RU2 1077 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 POLR3CQ9BUI4 534 aaPredicted RBP22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 SEPT9Q9UHD8 586 aaPredicted RBP22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 CEP131Q9UPN4 1083 aa22.73■■□□□ 1.23
TSPAN3-207ENST00000559494 TET1Q8NFU7 2136 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 A0A087WWV3 80 aa22.72■■□□□ 1.23
TSPAN3-207ENST00000559494 RBAK-RBAKDNI3L0D1 243 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms