RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 DNAJB3Q8WWF6 145 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 LINC01599Q8WXQ3 324 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 PDCD2LQ9BRP1 358 aa11.25□□□□□ -0.61
SMAD3-211ENST00000559460 SUPT16HQ9Y5B9 1047 aaKnown RBP11.25□□□□□ -0.61
SMAD3-211ENST00000559460 VPS13AQ96RL7 3174 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 DENND3A2RUS2 1198 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 HIDE1A8MVS5 230 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 ADAM17P78536 824 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 SP2Q02086 613 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 SP4Q02446 784 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 PGM5Q15124 567 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 CYFIP1Q7L576 1253 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 UBA5Q9GZZ9 404 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 AGO3Q9H9G7 860 aaKnown RBP11.24□□□□□ -0.61
SMAD3-211ENST00000559460 TBC1D17Q9HA65 648 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 ECHDC1Q9NTX5 307 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 IGSF9Q9P2J2 1179 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 WNT16Q9UBV4 365 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 CA14Q9ULX7 337 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 SIT1Q9Y3P8 196 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 TRPV2Q9Y5S1 764 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 TTC3P53804 2025 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 DMDP11532 3685 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
SMAD3-211ENST00000559460 ZNF292O60281 2723 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 DCNP07585 359 aaKnown RBP11.23□□□□□ -0.61
SMAD3-211ENST00000559460 NOVP48745 357 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 ODR4Q5SWX8 454 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 ATRIPQ8WXE1 791 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-211ENST00000559460 KCNK12Q9HB15 430 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
SMAD3-211ENST00000559460 GMEB2Q9UKD1 530 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 ANGPTL2Q9UKU9 493 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 PADI3Q9ULW8 664 aa11.23□□□□□ -0.61
SMAD3-211ENST00000559460 DNAH14Q0VDD8 3507 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 ORC4O43929 436 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 IGBP1P78318 339 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 NFX1Q12986 1120 aaKnown RBP11.22□□□□□ -0.61
SMAD3-211ENST00000559460 GRIK4Q16099 956 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 RTN4RL1Q86UN2 441 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-211ENST00000559460 CABP7Q86V35 215 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 ABI1Q8IZP0 508 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 CRIPAKQ8N1N5 446 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 TTC14Q96N46 770 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 ZNF558Q96NG5 402 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 MAP3K20Q9NYL2 800 aaKnown RBP11.22□□□□□ -0.61
SMAD3-211ENST00000559460 PCDHA1Q9Y5I3 950 aa11.22□□□□□ -0.61
SMAD3-211ENST00000559460 LAMTOR5O43504 91 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 SNHG28P0DPA3 235 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 MARK3P27448 753 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 HSD17B4P51659 736 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 QRICH1Q2TAL8 776 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 FAM43BQ6ZT52 329 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-211ENST00000559460 ADGRF4Q8IZF3 695 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 C12orf76Q8N812 135 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-211ENST00000559460 GLG1Q92896 1179 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SMAD3-211ENST00000559460 TNPO1Q92973 898 aaKnown RBP11.21□□□□□ -0.61
SMAD3-211ENST00000559460 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-211ENST00000559460 AMNQ9BXJ7 453 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 TCP11L1Q9NUJ3 509 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 ERAP1Q9NZ08 941 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 SPG21Q9NZD8 308 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 RAB23Q9ULC3 237 aa11.21□□□□□ -0.61
SMAD3-211ENST00000559460 SMG5Q9UPR3 1016 aaKnown RBP11.21□□□□□ -0.61
SMAD3-211ENST00000559460 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-211ENST00000559460 KRBA1A5PL33 1030 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 C2orf71A6NGG8 1288 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 HOXA2O43364 376 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 FIBPO43427 364 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 NARSO43776 548 aaKnown RBP11.2□□□□□ -0.62
SMAD3-211ENST00000559460 CLASP2O75122 1294 aaKnown RBP11.2□□□□□ -0.62
SMAD3-211ENST00000559460 STAM2O75886 525 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 ARP10275 920 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 PDE4AP27815 886 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 TMEM62Q0P6H9 643 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 KCNT2Q6UVM3 1135 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 TMC5Q6UXY8 1006 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 STOX1Q6ZVD7 989 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 SAMD3Q8N6K7 520 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 MRPL43Q8N983 215 aaKnown RBP11.2□□□□□ -0.62
SMAD3-211ENST00000559460 NETO1Q8TDF5 533 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 DDX1Q92499 740 aaKnown RBP11.2□□□□□ -0.62
SMAD3-211ENST00000559460 SEC62Q99442 399 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms