RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 PAPD7Q5XG87 772 aaKnown RBP12.41□□□□□ -0.42
CLPX-204ENST00000559152 TRAPPC11Q7Z392 1133 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 GOLGA5Q8TBA6 731 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 PIGOQ8TEQ8 1089 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
CLPX-204ENST00000559152 CLEC4DQ8WXI8 215 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 LSM14BQ9BX40 385 aaKnown RBP12.41□□□□□ -0.42
CLPX-204ENST00000559152 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 CD2APQ9Y5K6 639 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 NFKBIEO00221 500 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 TACC1O75410 805 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 PRPF6O94906 941 aaKnown RBP12.41□□□□□ -0.42
CLPX-204ENST00000559152 UBXN2AP68543 259 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 BRD3Q15059 726 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 KRT222Q8N1A0 295 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 ALS2CR12Q96Q35 445 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 PPP1R9AQ9ULJ8 1098 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 ARHGEF35A5YM69 484 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 FLOT1O75955 427 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 P4HBP07237 508 aaKnown RBP12.4□□□□□ -0.42
CLPX-204ENST00000559152 ALAS1P13196 640 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
CLPX-204ENST00000559152 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
CLPX-204ENST00000559152 CBX1P83916 185 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 MIER3Q7Z3K6 550 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 LXNQ9BS40 222 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 MKNK1Q9BUB5 465 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 JADE2Q9NQC1 790 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 KCNH7Q9NS40 1196 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 TRIM10Q9UDY6 481 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.42
CLPX-204ENST00000559152 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
CLPX-204ENST00000559152 HACL1Q9UJ83 578 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 UBIAD1Q9Y5Z9 338 aa12.4□□□□□ -0.42
CLPX-204ENST00000559152 BZW2Q9Y6E2 419 aaKnown RBP12.4□□□□□ -0.42
CLPX-204ENST00000559152 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.43
CLPX-204ENST00000559152 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 RSPH10B2B2RC85 870 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 PJA2O43164 708 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 NOL4O94818 638 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 RSPH10BP0C881 870 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 ITGB5P18084 799 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 HOXD13P35453 343 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 PSMC2P35998 433 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 MAGEA1P43355 309 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 ALCAMQ13740 583 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 IQCEQ6IPM2 695 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 XRRA1Q6P2D8 792 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 FAM178BQ8IXR5 827 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 RNF10Q8N5U6 811 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 PARD6BQ9BYG5 372 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 FAM53CQ9NYF3 392 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 AIPL1Q9NZN9 384 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 FBXL5Q9UKA1 691 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 ASTN1O14525 1302 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 FZD9O00144 591 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 NFIBO00712 420 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 PLEKP08567 350 aaPredicted RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 MAPTP10636 758 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 VCAM1P19320 739 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 ERCC3P19447 782 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 MTMR1Q13613 665 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 MYBPC2Q14324 1141 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 ASTE1Q2TB18 679 aaPredicted RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 ZNF720Q7Z2F6 126 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 SYTL5Q8TDW5 730 aaPredicted RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 MAF1Q9H063 256 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 RAVER2Q9HCJ3 691 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 AGO4Q9HCK5 861 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 NLRC4Q9NPP4 1024 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
CLPX-204ENST00000559152 DBR1Q9UK59 544 aaKnown RBP12.39□□□□□ -0.43
CLPX-204ENST00000559152 ZNF263O14978 683 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 ERLIN1O75477 346 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLPX-204ENST00000559152 PRLRP16471 622 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 MCM3P25205 808 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 ANXA13P27216 316 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 EXOC3L4Q17RC7 722 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms