RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 MYOGP15173 224 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 SELPP16109 830 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 PPFIA1Q13136 1202 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 PTK7Q13308 1070 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 BLIDQ8IZY5 108 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 NKX2-4Q9H2Z4 354 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 AZI2Q9H6S1 392 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 PCDHA4Q9UN74 947 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 SLC4A7Q9Y6M7 1214 aa13.64□□□□□ -0.23
TPM1-216ENST00000558910 MEIS1O00470 390 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 CTDNEP1O95476 244 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 IBSPP21815 317 aaPredicted RBP13.63□□□□□ -0.23
TPM1-216ENST00000558910 DNAJB2P25686 324 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 GRIK4Q16099 956 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 VWCEQ96DN2 955 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 PCYT2Q99447 389 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 PBX4Q9BYU1 374 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
TPM1-216ENST00000558910 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
TPM1-216ENST00000558910 MTMR10Q9NXD2 777 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 SAMM50Q9Y512 469 aa13.63□□□□□ -0.23
TPM1-216ENST00000558910 TRIP12Q14669 1992 aaPredicted RBP13.63□□□□□ -0.23
TPM1-216ENST00000558910 RSPH10B2B2RC85 870 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 IPO5O00410 1097 aaKnown RBP13.62□□□□□ -0.23
TPM1-216ENST00000558910 NBNO60934 754 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 TDP2O95551 362 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 CCNE2O96020 404 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 RSPH10BP0C881 870 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 ACTN1P12814 892 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 SMAD3P84022 425 aaKnown RBP13.62□□□□□ -0.23
TPM1-216ENST00000558910 GUCY1B3Q02153 619 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 TMEM62Q0P6H9 643 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 INF2Q27J81 1249 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 SWSAP1Q6NVH7 229 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 MYLIPQ8WY64 445 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 TIFAQ96CG3 184 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 C22orf23Q9BZE7 217 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 OSBPL7Q9BZF2 842 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 TTYH1Q9H313 450 aaPredicted RBP13.62□□□□□ -0.23
TPM1-216ENST00000558910 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 CERS4Q9HA82 394 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 ERAP1Q9NZ08 941 aa13.62□□□□□ -0.23
TPM1-216ENST00000558910 IGLV3-22A0A075B6J6 115 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 MAFGO15525 162 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 EIF5BO60841 1220 aaKnown RBP13.61□□□□□ -0.23
TPM1-216ENST00000558910 GNAT1P11488 350 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 INSRRP14616 1297 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 ATP2A2P16615 1042 aaKnown RBP13.61□□□□□ -0.23
TPM1-216ENST00000558910 KCNJ6P48051 423 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 STAT5BP51692 787 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 TRIM71Q2Q1W2 868 aaKnown RBP13.61□□□□□ -0.23
TPM1-216ENST00000558910 LETM2Q2VYF4 491 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 SERINC5Q86VE9 423 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 GUCD1Q96NT3 240 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 PPP1R16BQ96T49 567 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 SH3GLB2Q9NR46 395 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 PLA2G2EQ9NZK7 142 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
TPM1-216ENST00000558910 YBX2Q9Y2T7 364 aaKnown RBP13.61□□□□□ -0.23
TPM1-216ENST00000558910 CCDC194A0A1B0GVG4 234 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 MSH4O15457 936 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 CYP3A4P08684 503 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 XBP1P17861 261 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 RFC2P35250 354 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 MBTPS1Q14703 1052 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 GPNMBQ14956 572 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 PADI6Q6TGC4 694 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 CCDC60Q8IWA6 550 aaPredicted RBP13.6□□□□□ -0.23
TPM1-216ENST00000558910 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 CDX2Q99626 313 aaPredicted RBP13.6□□□□□ -0.23
TPM1-216ENST00000558910 ZNF302Q9NR11 478 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 TUBE1Q9UJT0 475 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 NFASCO94856 1347 aa13.6□□□□□ -0.23
TPM1-216ENST00000558910 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
TPM1-216ENST00000558910 EDIL3O43854 480 aa13.59□□□□□ -0.23
TPM1-216ENST00000558910 MARCH6O60337 910 aa13.59□□□□□ -0.23
TPM1-216ENST00000558910 GAS7O60861 476 aa13.59□□□□□ -0.23
TPM1-216ENST00000558910 FDPSP14324 419 aaKnown RBP13.59□□□□□ -0.23
TPM1-216ENST00000558910 ATP2B1P20020 1258 aa13.59□□□□□ -0.23
TPM1-216ENST00000558910 DEFB103AP81534 67 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms