RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 PAWRQ96IZ0 340 aaKnown RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 AK8Q96MA6 479 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 C16orf45Q96MC5 204 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 RAB34Q9BZG1 259 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 WDR11Q9BZH6 1224 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 BCAS3Q9H6U6 928 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 TMEM260Q9NX78 707 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 DDX25Q9UHL0 483 aaKnown RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 FAM184BQ9ULE4 1060 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 VWA3AA6NCI4 1184 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 FAM205CA6NFA0 338 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 SPATA31C2B4DYI2 1134 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 FAM86B1E9PN63 330 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 PGK1P00558 417 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 TUBB4AP04350 444 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 FAM86B2P0C5J1 330 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 AKR1A1P14550 325 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 ITGB5P18084 799 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 EIF2AK2P19525 551 aaKnown RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 CDK11BP21127 795 aaKnown RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 ERCC5P28715 1186 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 SARSP49591 514 aaKnown RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 SP2Q02086 613 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 NEDD9Q14511 834 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 PDIA5Q14554 519 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 TTLL4Q14679 1199 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 PTPN14Q15678 1187 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 LETM2Q2VYF4 491 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 EARS2Q5JPH6 523 aaKnown RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 GJC2Q5T442 439 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 CEP135Q66GS9 1140 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 B3GNT9Q6UX72 402 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 EEPD1Q7L9B9 569 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 SMAP1Q8IYB5 467 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 IQUBQ8NA54 791 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 ETNPPLQ8TBG4 499 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 NEK9Q8TD19 979 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 RASGRP4Q8TDF6 673 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 SLC5A5Q92911 643 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 MTMR9Q96QG7 549 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 KCND1Q9NSA2 647 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 RMND1Q9NWS8 449 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
LRRC28-211ENST00000558890 WDR81Q562E7 1941 aa8.56□□□□□ -1.04
LRRC28-211ENST00000558890 LAMA3Q16787 3333 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 SYNRGQ9UMZ2 1314 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 CCNT1O60563 726 aaKnown RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 FARP2O94887 1054 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 OR52Z1P0C646 297 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 CNGA1P29973 690 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 SFNP31947 248 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 MCM7P33993 719 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 ZNF76P36508 570 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 LONP1P36776 959 aaKnown RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 KRT76Q01546 638 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 TNFAIP2Q03169 654 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 PTGDRQ13258 359 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 PPP2R5CQ13362 524 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 ARID5BQ14865 1188 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 SNX17Q15036 470 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 KCNA10Q16322 511 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 TMEM266Q2M3C6 531 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 ZNF746Q6NUN9 644 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 VSTM4Q8IW00 320 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 CCAR2Q8N163 923 aaKnown RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 C4orf32Q8N8J7 132 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 IGSF22Q8N9C0 903 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 RASSF8Q8NHQ8 419 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 COPS5Q92905 334 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 FAM212AQ96EL1 285 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 PAGE5Q96GU1 130 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 ZFP91Q96JP5 570 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 GSDMAQ96QA5 445 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 TSEN34Q9BSV6 310 aaKnown RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 PDCL3Q9H2J4 239 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 KCNH7Q9NS40 1196 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 FANCLQ9NW38 375 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 TCEAL9Q9UHQ7 104 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 ZHX1Q9UKY1 873 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-211ENST00000558890 PHF24Q9UPV7 400 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 NFE2L3Q9Y4A8 694 aa8.55□□□□□ -1.04
LRRC28-211ENST00000558890 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 A6NJR5 290 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 IPO5O00410 1097 aaKnown RBP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 DNM1LO00429 736 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 DYNC1LI2O43237 492 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 PSMD10O75832 226 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 TDP2O95551 362 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 RARBP10826 455 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 ATP1A3P13637 1013 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 KCNA2P16389 499 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 AFMP43652 599 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 SLC26A2P50443 739 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 CDK7P50613 346 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 JAK3P52333 1124 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms