RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CAGE1Q8TC20 777 aa15.6■□□□□ 0.09
TSPAN3-205ENST00000558745 CXXC1Q9P0U4 656 aaPredicted RBP15.6■□□□□ 0.09
TSPAN3-205ENST00000558745 VAV3Q9UKW4 847 aa15.6■□□□□ 0.09
TSPAN3-205ENST00000558745 TET1Q8NFU7 2136 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 TMEM150BA6NC51 233 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 GRXCR1A8MXD5 290 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 NBNO60934 754 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 TOB1P50616 345 aaPredicted RBP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 LARP1BQ659C4 914 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 FAM109BQ6ICB4 259 aaPredicted RBP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 NOSTRINQ8IVI9 506 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 CCDC155Q8N6L0 562 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 BANK1Q8NDB2 785 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 ATP8B4Q8TF62 1192 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 DNAJB3Q8WWF6 145 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 RNPC3Q96LT9 517 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 FAM20AQ96MK3 541 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 SH2D3AQ9BRG2 576 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 FTOQ9C0B1 505 aaKnown RBP eCLIP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 FAM49AQ9H0Q0 323 aaPredicted RBP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 TUBE1Q9UJT0 475 aa15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.59■□□□□ 0.09
TSPAN3-205ENST00000558745 RRN3P2A6NIE6 340 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 RSPH10B2B2RC85 870 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 ZBTB42B2RXF5 422 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 HBP1O60381 514 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 RSPH10BP0C881 870 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 U2AF2P26368 475 aaKnown RBP eCLIP15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 KLRC1P26715 233 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 TXKP42681 527 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 JAK3P52333 1124 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 RBL2Q08999 1139 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 TMEM62Q0P6H9 643 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 CALCRLQ16602 461 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 NCAPH2Q6IBW4 605 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 MTHFD1LQ6UB35 978 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 RPUSD2Q8IZ73 545 aaKnown RBP15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 NAP1L4Q99733 375 aaKnown RBP15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 PRDM6Q9NQX0 595 aa15.58■□□□□ 0.08
TSPAN3-205ENST00000558745 IGSF9BQ9UPX0 1349 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 A0A087WWV3 80 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 MBLAC1A4D2B0 266 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 H3BQV1 296 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 K7ELQ4 463 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 TBX3O15119 743 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 STBD1O95210 358 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 BAG4O95429 457 aaKnown RBP15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 SFNP31947 248 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 SLC26A2P50443 739 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 SPIRE1Q08AE8 756 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 PPP2R5CQ13362 524 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 LRIT3Q3SXY7 679 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 TTC38Q5R3I4 469 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 MTMR9Q96QG7 549 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 RGL1Q9NZL6 768 aa15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 WRAP73Q9P2S5 460 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-205ENST00000558745 ZBBXA8MT70 800 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 ZBTB39O15060 712 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 NEMFO60524 1076 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 CHRNA1P02708 482 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 PRKCEQ02156 737 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 CTTNQ14247 550 aaKnown RBP15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 ZNF484Q5JVG2 852 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 PSRC1Q6PGN9 363 aaPredicted RBP15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 BBXQ8WY36 941 aaPredicted RBP15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 HERVK_113Q902F9 699 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 DYDC2Q96IM9 177 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 PCDHA12Q9UN75 941 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 KIF3AQ9Y496 699 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 PCDHB6Q9Y5E3 794 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 MYH9P35579 1960 aaKnown RBP15.56■□□□□ 0.08
TSPAN3-205ENST00000558745 WDR81Q562E7 1941 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 DDX11L8A8MPP1 907 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 OATP04181 439 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 RFC2P35250 354 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 EPHA7Q15375 998 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 SLFN12Q8IYM2 578 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 C4orf32Q8N8J7 132 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 SNX21Q969T3 373 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 PPP1R16BQ96T49 567 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 NRBP2Q9NSY0 501 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 MTMR10Q9NXD2 777 aa15.55■□□□□ 0.08
TSPAN3-205ENST00000558745 CXCL10P02778 98 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 TECP42680 631 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 CYP4A11Q02928 519 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 MGAT3Q09327 533 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 MTERF2Q49AM1 385 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 TAF2Q6P1X5 1199 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 TMCO2Q7Z6W1 182 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 KIAA0319LQ8IZA0 1049 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 SPRYD3Q8NCJ5 442 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 RDM1Q8NG50 284 aa15.54■□□□□ 0.08
TSPAN3-205ENST00000558745 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms