RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 RARS2Q5T160 578 aaKnown RBP13.83□□□□□ -0.2
SMAD3-206ENST00000558739 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 MCF2L2Q86YR7 1114 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 ZDHHC14Q8IZN3 488 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 USP26Q9BXU7 913 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-206ENST00000558739 ADAM7Q9H2U9 754 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 ANAPC4Q9UJX5 808 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
SMAD3-206ENST00000558739 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 DCDC2BA2VCK2 349 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 MGEA5O60502 916 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 PPP1R11O60927 126 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-206ENST00000558739 MARK3P27448 753 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 MRPS6P82932 125 aaKnown RBP13.82□□□□□ -0.2
SMAD3-206ENST00000558739 PPFIA1Q13136 1202 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 TAF2Q6P1X5 1199 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 SUMF1Q8NBK3 374 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 TYW1Q9NV66 732 aaKnown RBP13.82□□□□□ -0.2
SMAD3-206ENST00000558739 TUBE1Q9UJT0 475 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 PADI3Q9ULW8 664 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 NRCAMQ92823 1304 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 AKAP13Q12802 2813 aa13.82□□□□□ -0.2
SMAD3-206ENST00000558739 LAMA5O15230 3695 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 KRBA1A5PL33 1030 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 KCNV1Q6PIU1 500 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 METTL7BQ6UX53 244 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 STOX1Q6ZVD7 989 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 NECTIN4Q96NY8 510 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 RTP3Q9BQQ7 232 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 SEMA4AQ9H3S1 761 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 CWH43Q9H720 699 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 JMJD4Q9H9V9 463 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 TCP11L1Q9NUJ3 509 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 FBXL21Q9UKT6 434 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 ZNF215Q9UL58 517 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-206ENST00000558739 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
SMAD3-206ENST00000558739 LOC400499M0QZD8 3231 aa13.81□□□□□ -0.2
SMAD3-206ENST00000558739 POTEMA6NI47 508 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 SP9P0CG40 484 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 STAG3L1P0CL83 205 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 TGFB3P10600 412 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 FGFR1P11362 822 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 HAND2P61296 217 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 IGBP1P78318 339 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 MRPS9P82933 396 aaKnown RBP13.8□□□□□ -0.2
SMAD3-206ENST00000558739 PAK2Q13177 524 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 GRIK4Q16099 956 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
SMAD3-206ENST00000558739 CES5AQ6NT32 575 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 CASP10Q92851 521 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 LRFN2Q9ULH4 789 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 DUSP12Q9UNI6 340 aa13.8□□□□□ -0.2
SMAD3-206ENST00000558739 DOCK8Q8NF50 2099 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 MBLAC1A4D2B0 266 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 CLASP2O75122 1294 aaKnown RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 EOMESO95936 686 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 DCNP07585 359 aaKnown RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 CCND2P30279 289 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 GHRHRQ02643 423 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 ITIH3Q06033 890 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 TPRNQ4KMQ1 711 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 FTHL17Q9BXU8 183 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 MAF1Q9H063 256 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 DBR1Q9UK59 544 aaKnown RBP13.79□□□□□ -0.2
SMAD3-206ENST00000558739 NEDD4P46934 1319 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 IGSF9BQ9UPX0 1349 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 LAMA1P25391 3075 aa13.79□□□□□ -0.2
SMAD3-206ENST00000558739 BPTFQ12830 3046 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 DMXL2Q8TDJ6 3036 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 C2orf71A6NGG8 1288 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 CFHP08603 1231 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 PDE4AP27815 886 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 MTHFRP42898 656 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 SARSP49591 514 aaKnown RBP13.78□□□□□ -0.2
SMAD3-206ENST00000558739 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
SMAD3-206ENST00000558739 RSPH3Q86UC2 560 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 FCHSD1Q86WN1 690 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 OTUD7AQ8TE49 926 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-206ENST00000558739 TRAPPC12Q8WVT3 735 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 RSAD2Q8WXG1 361 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 TBC1D17Q9HA65 648 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 KCNK12Q9HB15 430 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 RTEL1Q9NZ71 1219 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
SMAD3-206ENST00000558739 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
SMAD3-206ENST00000558739 SPATA31C2B4DYI2 1134 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms